Gene : Solyc09g090960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 21) KOG0131 - Splicing factor 3b, subunit 4 Description:  RNA-binding protein (AHRD V1 **-* Q8SMH8_PERAE); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1
Genomic Order:  2238 Name:  ? Solyc09g090960.2
Secondary Identifier:  ? PAC:36131624
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g090960.2 0.5kb upstream 0.5kb upstream 3071 true SL2.50ch09: 70342832-70345902 Solanum lycopersicum
Solyc09g090960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 70345403-70345902 Solanum lycopersicum
Solyc09g090960.2 0.5kb downstream 0.5kb downstream 3071 true SL2.50ch09: 70342332-70345402 Solanum lycopersicum
Solyc09g090960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 70342332-70342831 Solanum lycopersicum
Solyc09g090960.2 1.0kb upstream 1.0kb upstream 3571 true SL2.50ch09: 70342832-70346402 Solanum lycopersicum
Solyc09g090960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 70345403-70346402 Solanum lycopersicum
Solyc09g090960.2 1.0kb downstream 1.0kb downstream 3571 true SL2.50ch09: 70341832-70345402 Solanum lycopersicum
Solyc09g090960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 70341832-70342831 Solanum lycopersicum
Solyc09g090960.2 2.0kb upstream 2.0kb upstream 4571 true SL2.50ch09: 70342832-70347402 Solanum lycopersicum
Solyc09g090960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 70345403-70347402 Solanum lycopersicum
Solyc09g090960.2 2.0kb downstream 2.0kb downstream 4571 true SL2.50ch09: 70340832-70345402 Solanum lycopersicum
Solyc09g090960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 70340832-70342831 Solanum lycopersicum
Solyc09g090960.2 5.0kb upstream 5.0kb upstream 7571 true SL2.50ch09: 70342832-70350402 Solanum lycopersicum
Solyc09g090960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 70345403-70350402 Solanum lycopersicum
Solyc09g090960.2 5.0kb downstream 5.0kb downstream 7571 true SL2.50ch09: 70337832-70345402 Solanum lycopersicum
Solyc09g090960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 70337832-70342831 Solanum lycopersicum
Solyc09g090960.2 10.0kb upstream 10.0kb upstream 12571 true SL2.50ch09: 70342832-70355402 Solanum lycopersicum
Solyc09g090960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 70345403-70355402 Solanum lycopersicum
Solyc09g090960.2 10.0kb downstream 10.0kb downstream 12571 true SL2.50ch09: 70332832-70345402 Solanum lycopersicum
Solyc09g090960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 70332832-70342831 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470136 5263 Asterids View MSA
123738370 5271 Pentapetalae View MSA
122790511 5272 Eudicot View MSA
122043782 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain