Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 122790511

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  43

43 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30008.t000019 (1 of 18) KOG0131 - Splicing factor 3b, subunit 4 R. communis v0.1 2038   30008: 96600-98637
Cucsa.255820 (1 of 15) KOG0131 - Splicing factor 3b, subunit 4 C. sativus v1.0 2819   scaffold02229: 3642427-3645245
AT1G60000 (1 of 2) 2.3.1.1//2.3.1.35 - Amino-acid N-acetyltransferase / N-acetylglutamate synthase // Glutamate N-acetyltransferase / Ornithine transacetylase A. thaliana TAIR10 1058   Chr1: 22093569-22094626
Thhalv10023650m.g (1 of 22) KOG0131 - Splicing factor 3b, subunit 4 E. salsugineum v1.0 1008   scaffold_8: 4646654-4647661
Ciclev10005487m.g (1 of 24) KOG0131 - Splicing factor 3b, subunit 4 C. clementina v1.0 3560   scaffold_9: 6896163-6899722
Lus10023723.g (1 of 3) KOG0106//KOG0131 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1757   scaffold505: 791857-793613
Gorai.005G054000 (1 of 32) KOG0131 - Splicing factor 3b, subunit 4 G. raimondii v2.1 2216   Chr05: 5342454-5344669
Thecc1EG021006 (1 of 24) KOG0131 - Splicing factor 3b, subunit 4 T. cacao v1.1 3055   scaffold_4: 31268646-31271700
Migut.G00576 (1 of 28) KOG0131 - Splicing factor 3b, subunit 4 M. guttatus v2.0 3170   scaffold_7: 3831062-3834231
Cagra.3285s0008 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 C. grandiflora v1.1 1016   Scaffold3285: 58000-59015
Glyma.10G134100 (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 G. max Wm82.a2.v1 9284   Chr10: 35954291-35963574
Glyma.20G082800 (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 G. max Wm82.a2.v1 8463   Chr20: 31236343-31244805
Brara.I01575 (1 of 44) KOG0131 - Splicing factor 3b, subunit 4 B. rapa FPsc v1.3 1121   A09: 10396165-10397285
Bostr.10040s0219 (1 of 26) KOG0131 - Splicing factor 3b, subunit 4 B. stricta v1.2 1021   Scaffold10040: 1971712-1972732
Medtr1g045510 (1 of 20) KOG0131 - Splicing factor 3b, subunit 4 M. truncatula Mt4.0v1 3146   chr1: 17072567-17075712
SapurV1A.0021s0400 (1 of 1) KOG0106//KOG0131//KOG0144//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) S. purpurea v1.0 3358   chr08: 12470527-12473884
Eucgr.H00128 (1 of 1) KOG0146 - RNA-binding protein ETR-3 (RRM superfamily) E. grandis v2.0 2797   Chr08: 4982054-4984850
Prupe.1G048800 (1 of 22) KOG0131 - Splicing factor 3b, subunit 4 P. persica v2.1 2668   Pp01: 3431594-3434261
Manes.15G045900 (1 of 1) KOG0106//KOG0114//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) M. esculenta v6.1 1771   Chromosome15: 3377570-3379340
Kalax.0026s0164 (1 of 50) KOG0131 - Splicing factor 3b, subunit 4 K. laxiflora v1.1 2474   scaffold_26: 1150988-1153461
Kalax.0643s0013 (1 of 50) KOG0131 - Splicing factor 3b, subunit 4 K. laxiflora v1.1 3880   scaffold_643: 84190-88069
Aqcoe2G384200 (1 of 1) KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) A. coerulea v3.1 2279   Chr_02: 40058557-40060835
Kaladp0082s0147 (1 of 26) KOG0131 - Splicing factor 3b, subunit 4 K. fedtschenkoi v1.1 2767   Scaffold_82: 1450289-1453055
AL2G16690 (1 of 31) KOG0131 - Splicing factor 3b, subunit 4 A. lyrata v2.1 1136   scaffold_2: 3458599-3459734
Tp57577_TGAC_v2_gene23968 (1 of 24) KOG0131 - Splicing factor 3b, subunit 4 T. pratense v2 2791   Tp57577_TGAC_v2_LG1: 12273802-12276592
DCAR_030763 (1 of 29) KOG0131 - Splicing factor 3b, subunit 4 D. carota v2.0 3410   DCARv2_Chr9: 29515330-29518739
Solyc09g090960.2 (1 of 21) KOG0131 - Splicing factor 3b, subunit 4 S. lycopersicum ITAG2.4 2571   SL2.50ch09: 70342832-70345402
AUR62018041 (1 of 16) KOG0114 - Predicted RNA-binding protein (RRM superfamily) C. quinoa v1.0 2242   C_Quinoa_Scaffold_2048: 283019-285260
AUR62015243 (1 of 16) KOG0114 - Predicted RNA-binding protein (RRM superfamily) C. quinoa v1.0 3244   C_Quinoa_Scaffold_2751: 316103-319346
Phvul.007G231600 (1 of 23) KOG0131 - Splicing factor 3b, subunit 4 P. vulgaris v2.1 2744   Chr07: 35501065-35503808

43 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Ciclev10005487m C. clementina v1.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Lus10023723 L. usitatissimum v1.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Thecc1EG021006t1 T. cacao v1.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Glyma.20G082800.1.p G. max Wm82.a2.v1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Brara.I01575.1.p B. rapa FPsc v1.3 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Bostr.10040s0219.1.p B. stricta v1.2 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Medtr1g045510.1 M. truncatula Mt4.0v1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
SapurV1A.0021s0400.1.p S. purpurea v1.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Kalax.0643s0013.1.p K. laxiflora v1.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Kalax.0026s0164.1.p K. laxiflora v1.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Aqcoe2G384200.1.p A. coerulea v3.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Kaladp0082s0147.1.p K. fedtschenkoi v1.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Tp57577_TGAC_v2_mRNA24794 T. pratense v2 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Solyc09g090960.2.1 S. lycopersicum ITAG2.4 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
AUR62018041-RA C. quinoa v1.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Phvul.007G231600.1.p P. vulgaris v2.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Lsat_1_v5_gn_2_41261.1 L. sativa V8 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Carub.0002s0524.1.p C. rubella v1.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
30008.m000803 R. communis v0.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Cucsa.255820.1 C. sativus v1.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
AT1G60000.1 A. thaliana TAIR10 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Thhalv10023650m E. salsugineum v1.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Gorai.005G054000.1 G. raimondii v2.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Migut.G00576.1.p M. guttatus v2.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Cagra.3285s0008.1.p C. grandiflora v1.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Glyma.10G134100.1.p G. max Wm82.a2.v1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5272 Eudicot
Eucgr.H00128.1.p E. grandis v2.0 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Prupe.1G048800.1.p P. persica v2.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
Manes.15G045900.1.p M. esculenta v6.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot
AL2G16690.t1 A. lyrata v2.1 122790511 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5272 Eudicot