Gene : Medtr1g045510 M. truncatula Mt4.0v1
Defline:  (1 of 20) KOG0131 - Splicing factor 3b, subunit 4 Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  2232 Name:  ? Medtr1g045510
Secondary Identifier:  ? PAC:31099307
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g045510 0.5kb upstream 0.5kb upstream 3646 true chr1: 17072067-17075712 Medicago truncatula
Medtr1g045510 0.5kb upstream 0.5kb upstream 500 false chr1: 17072067-17072566 Medicago truncatula
Medtr1g045510 0.5kb downstream 0.5kb downstream 3646 true chr1: 17072567-17076212 Medicago truncatula
Medtr1g045510 0.5kb downstream 0.5kb downstream 500 false chr1: 17075713-17076212 Medicago truncatula
Medtr1g045510 1.0kb upstream 1.0kb upstream 4146 true chr1: 17071567-17075712 Medicago truncatula
Medtr1g045510 1.0kb upstream 1.0kb upstream 1000 false chr1: 17071567-17072566 Medicago truncatula
Medtr1g045510 1.0kb downstream 1.0kb downstream 4146 true chr1: 17072567-17076712 Medicago truncatula
Medtr1g045510 1.0kb downstream 1.0kb downstream 1000 false chr1: 17075713-17076712 Medicago truncatula
Medtr1g045510 2.0kb upstream 2.0kb upstream 5146 true chr1: 17070567-17075712 Medicago truncatula
Medtr1g045510 2.0kb upstream 2.0kb upstream 2000 false chr1: 17070567-17072566 Medicago truncatula
Medtr1g045510 2.0kb downstream 2.0kb downstream 5146 true chr1: 17072567-17077712 Medicago truncatula
Medtr1g045510 2.0kb downstream 2.0kb downstream 2000 false chr1: 17075713-17077712 Medicago truncatula
Medtr1g045510 5.0kb upstream 5.0kb upstream 8146 true chr1: 17067567-17075712 Medicago truncatula
Medtr1g045510 5.0kb upstream 5.0kb upstream 5000 false chr1: 17067567-17072566 Medicago truncatula
Medtr1g045510 5.0kb downstream 5.0kb downstream 8146 true chr1: 17072567-17080712 Medicago truncatula
Medtr1g045510 5.0kb downstream 5.0kb downstream 5000 false chr1: 17075713-17080712 Medicago truncatula
Medtr1g045510 10.0kb upstream 10.0kb upstream 13146 true chr1: 17062567-17075712 Medicago truncatula
Medtr1g045510 10.0kb upstream 10.0kb upstream 10000 false chr1: 17062567-17072566 Medicago truncatula
Medtr1g045510 10.0kb downstream 10.0kb downstream 13146 true chr1: 17072567-17085712 Medicago truncatula
Medtr1g045510 10.0kb downstream 10.0kb downstream 10000 false chr1: 17075713-17085712 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303187 5265 Fabidae View MSA
124063462 5270 Rosid View MSA
123738370 5271 Pentapetalae View MSA
122790511 5272 Eudicot View MSA
122043782 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.154        
cufflinks 191.628     High High
cufflinks 192.204     High High
cufflinks 0.082       Low
cufflinks 216.068     High High
cufflinks 0.097     Low  
cufflinks 0.205        
cufflinks 233.171     High High
cufflinks 0.075     Low Low

0 Strain