Gene : Cagra.3285s0008 C. grandiflora v1.1
Defline:  (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  8
Name:  ? Cagra.3285s0008 Secondary Identifier:  ? PAC:28909411
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.3285s0008 0.5kb upstream 0.5kb upstream 1516 true Scaffold3285: 57500-59015 Capsella grandiflora
Cagra.3285s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold3285: 57500-57999 Capsella grandiflora
Cagra.3285s0008 0.5kb downstream 0.5kb downstream 1516 true Scaffold3285: 58000-59515 Capsella grandiflora
Cagra.3285s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold3285: 59016-59515 Capsella grandiflora
Cagra.3285s0008 1.0kb upstream 1.0kb upstream 2016 true Scaffold3285: 57000-59015 Capsella grandiflora
Cagra.3285s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold3285: 57000-57999 Capsella grandiflora
Cagra.3285s0008 1.0kb downstream 1.0kb downstream 2016 true Scaffold3285: 58000-60015 Capsella grandiflora
Cagra.3285s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold3285: 59016-60015 Capsella grandiflora
Cagra.3285s0008 2.0kb upstream 2.0kb upstream 3016 true Scaffold3285: 56000-59015 Capsella grandiflora
Cagra.3285s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold3285: 56000-57999 Capsella grandiflora
Cagra.3285s0008 2.0kb downstream 2.0kb downstream 3016 true Scaffold3285: 58000-61015 Capsella grandiflora
Cagra.3285s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold3285: 59016-61015 Capsella grandiflora
Cagra.3285s0008 5.0kb upstream 5.0kb upstream 6016 true Scaffold3285: 53000-59015 Capsella grandiflora
Cagra.3285s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold3285: 53000-57999 Capsella grandiflora
Cagra.3285s0008 5.0kb downstream 5.0kb downstream 6016 true Scaffold3285: 58000-64015 Capsella grandiflora
Cagra.3285s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold3285: 59016-64015 Capsella grandiflora
Cagra.3285s0008 10.0kb upstream 10.0kb upstream 11016 true Scaffold3285: 48000-59015 Capsella grandiflora
Cagra.3285s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold3285: 48000-57999 Capsella grandiflora
Cagra.3285s0008 10.0kb downstream 10.0kb downstream 11016 true Scaffold3285: 58000-69015 Capsella grandiflora
Cagra.3285s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold3285: 59016-69015 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373408 5261 Brassicaceae View MSA
123830453 5264 Brassicales-Malvales View MSA
124343529 5266 SBM View MSA
124252431 5268 Malvidae View MSA
124063462 5270 Rosid View MSA
123738370 5271 Pentapetalae View MSA
122790511 5272 Eudicot View MSA
122043782 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain