Gene : Thecc1EG021006 T. cacao v1.1
Defline:  (1 of 24) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  2673
Name:  ? Thecc1EG021006 Secondary Identifier:  ? PAC:27451647
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG021006 0.5kb upstream 0.5kb upstream 3555 true scaffold_4: 31268146-31271700 Theobroma cacao
Thecc1EG021006 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 31268146-31268645 Theobroma cacao
Thecc1EG021006 0.5kb downstream 0.5kb downstream 3555 true scaffold_4: 31268646-31272200 Theobroma cacao
Thecc1EG021006 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 31271701-31272200 Theobroma cacao
Thecc1EG021006 1.0kb upstream 1.0kb upstream 4055 true scaffold_4: 31267646-31271700 Theobroma cacao
Thecc1EG021006 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 31267646-31268645 Theobroma cacao
Thecc1EG021006 1.0kb downstream 1.0kb downstream 4055 true scaffold_4: 31268646-31272700 Theobroma cacao
Thecc1EG021006 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 31271701-31272700 Theobroma cacao
Thecc1EG021006 2.0kb upstream 2.0kb upstream 5055 true scaffold_4: 31266646-31271700 Theobroma cacao
Thecc1EG021006 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 31266646-31268645 Theobroma cacao
Thecc1EG021006 2.0kb downstream 2.0kb downstream 5055 true scaffold_4: 31268646-31273700 Theobroma cacao
Thecc1EG021006 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 31271701-31273700 Theobroma cacao
Thecc1EG021006 5.0kb upstream 5.0kb upstream 8055 true scaffold_4: 31263646-31271700 Theobroma cacao
Thecc1EG021006 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 31263646-31268645 Theobroma cacao
Thecc1EG021006 5.0kb downstream 5.0kb downstream 8055 true scaffold_4: 31268646-31276700 Theobroma cacao
Thecc1EG021006 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 31271701-31276700 Theobroma cacao
Thecc1EG021006 10.0kb upstream 10.0kb upstream 13055 true scaffold_4: 31258646-31271700 Theobroma cacao
Thecc1EG021006 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 31258646-31268645 Theobroma cacao
Thecc1EG021006 10.0kb downstream 10.0kb downstream 13055 true scaffold_4: 31268646-31281700 Theobroma cacao
Thecc1EG021006 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 31271701-31281700 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830453 5264 Brassicales-Malvales View MSA
124343529 5266 SBM View MSA
124252431 5268 Malvidae View MSA
124063462 5270 Rosid View MSA
123738370 5271 Pentapetalae View MSA
122790511 5272 Eudicot View MSA
122043782 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain