Gene : Solyc09g090840.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02434 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B (gatB, PET112) Description:  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (AHRD V1 ***- D4ZRW8_SPIPL); contains Interpro domain(s) IPR004413 Glutamyl-tRNA(Gln) amidotransferase, B subunit
Genomic Order:  2226 Name:  ? Solyc09g090840.2
Secondary Identifier:  ? PAC:36133286
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5921 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc09g090840.2 0.5kb upstream 0.5kb upstream 6971 true SL2.50ch09: 70241876-70248846 Solanum lycopersicum
Solyc09g090840.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch09: 70241876-70242375 Solanum lycopersicum
Solyc09g090840.2 0.5kb downstream 0.5kb downstream 6971 true SL2.50ch09: 70242376-70249346 Solanum lycopersicum
Solyc09g090840.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch09: 70248847-70249346 Solanum lycopersicum
Solyc09g090840.2 1.0kb upstream 1.0kb upstream 7471 true SL2.50ch09: 70241376-70248846 Solanum lycopersicum
Solyc09g090840.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch09: 70241376-70242375 Solanum lycopersicum
Solyc09g090840.2 1.0kb downstream 1.0kb downstream 7471 true SL2.50ch09: 70242376-70249846 Solanum lycopersicum
Solyc09g090840.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch09: 70248847-70249846 Solanum lycopersicum
Solyc09g090840.2 2.0kb upstream 2.0kb upstream 8471 true SL2.50ch09: 70240376-70248846 Solanum lycopersicum
Solyc09g090840.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch09: 70240376-70242375 Solanum lycopersicum
Solyc09g090840.2 2.0kb downstream 2.0kb downstream 8471 true SL2.50ch09: 70242376-70250846 Solanum lycopersicum
Solyc09g090840.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch09: 70248847-70250846 Solanum lycopersicum
Solyc09g090840.2 5.0kb upstream 5.0kb upstream 11471 true SL2.50ch09: 70237376-70248846 Solanum lycopersicum
Solyc09g090840.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch09: 70237376-70242375 Solanum lycopersicum
Solyc09g090840.2 5.0kb downstream 5.0kb downstream 11471 true SL2.50ch09: 70242376-70253846 Solanum lycopersicum
Solyc09g090840.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch09: 70248847-70253846 Solanum lycopersicum
Solyc09g090840.2 10.0kb upstream 10.0kb upstream 16471 true SL2.50ch09: 70232376-70248846 Solanum lycopersicum
Solyc09g090840.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch09: 70232376-70242375 Solanum lycopersicum
Solyc09g090840.2 10.0kb downstream 10.0kb downstream 16471 true SL2.50ch09: 70242376-70258846 Solanum lycopersicum
Solyc09g090840.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch09: 70248847-70258846 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473107 5263 Asterids View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain