Gene : Solyc05g008900.2 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Description:  COSII_At1g13380 (Fragment) (AHRD V1 *-*- C0KEY4_DATIN); contains Interpro domain(s) IPR009606 Protein of unknown function DUF1218
Genomic Order:  389 Name:  ? Solyc05g008900.2
Secondary Identifier:  ? PAC:36145505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g008900.2 0.5kb upstream 0.5kb upstream 5180 true SL2.50ch05: 3110785-3115964 Solanum lycopersicum
Solyc05g008900.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 3115465-3115964 Solanum lycopersicum
Solyc05g008900.2 0.5kb downstream 0.5kb downstream 5180 true SL2.50ch05: 3110285-3115464 Solanum lycopersicum
Solyc05g008900.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 3110285-3110784 Solanum lycopersicum
Solyc05g008900.2 1.0kb upstream 1.0kb upstream 5680 true SL2.50ch05: 3110785-3116464 Solanum lycopersicum
Solyc05g008900.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 3115465-3116464 Solanum lycopersicum
Solyc05g008900.2 1.0kb downstream 1.0kb downstream 5680 true SL2.50ch05: 3109785-3115464 Solanum lycopersicum
Solyc05g008900.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 3109785-3110784 Solanum lycopersicum
Solyc05g008900.2 2.0kb upstream 2.0kb upstream 6680 true SL2.50ch05: 3110785-3117464 Solanum lycopersicum
Solyc05g008900.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 3115465-3117464 Solanum lycopersicum
Solyc05g008900.2 2.0kb downstream 2.0kb downstream 6680 true SL2.50ch05: 3108785-3115464 Solanum lycopersicum
Solyc05g008900.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 3108785-3110784 Solanum lycopersicum
Solyc05g008900.2 5.0kb upstream 5.0kb upstream 9680 true SL2.50ch05: 3110785-3120464 Solanum lycopersicum
Solyc05g008900.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 3115465-3120464 Solanum lycopersicum
Solyc05g008900.2 5.0kb downstream 5.0kb downstream 9680 true SL2.50ch05: 3105785-3115464 Solanum lycopersicum
Solyc05g008900.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 3105785-3110784 Solanum lycopersicum
Solyc05g008900.2 10.0kb upstream 10.0kb upstream 14680 true SL2.50ch05: 3110785-3125464 Solanum lycopersicum
Solyc05g008900.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 3115465-3125464 Solanum lycopersicum
Solyc05g008900.2 10.0kb downstream 10.0kb downstream 14680 true SL2.50ch05: 3100785-3115464 Solanum lycopersicum
Solyc05g008900.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 3100785-3110784 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469332 5263 Asterids View MSA
123737979 5271 Pentapetalae View MSA
122790075 5272 Eudicot View MSA
122049951 5273 Angiosperm View MSA
121351740 5274 Embryophyte View MSA
123382300 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain