Gene : Solyc05g009980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF09532//PF14438 - FDF domain (FDF) // Ataxin 2 SM domain (SM-ATX) Description:  Protein LSM14 homolog B (AHRD V1 *--- LS14B_MOUSE); contains Interpro domain(s) IPR019053 FFD and TFG box motifs
Genomic Order:  497 Name:  ? Solyc05g009980.2
Secondary Identifier:  ? PAC:36146498
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g009980.2 0.5kb upstream 0.5kb upstream 7780 true SL2.50ch05: 4176174-4183953 Solanum lycopersicum
Solyc05g009980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 4183454-4183953 Solanum lycopersicum
Solyc05g009980.2 0.5kb downstream 0.5kb downstream 7780 true SL2.50ch05: 4175674-4183453 Solanum lycopersicum
Solyc05g009980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 4175674-4176173 Solanum lycopersicum
Solyc05g009980.2 1.0kb upstream 1.0kb upstream 8280 true SL2.50ch05: 4176174-4184453 Solanum lycopersicum
Solyc05g009980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 4183454-4184453 Solanum lycopersicum
Solyc05g009980.2 1.0kb downstream 1.0kb downstream 8280 true SL2.50ch05: 4175174-4183453 Solanum lycopersicum
Solyc05g009980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 4175174-4176173 Solanum lycopersicum
Solyc05g009980.2 2.0kb upstream 2.0kb upstream 9280 true SL2.50ch05: 4176174-4185453 Solanum lycopersicum
Solyc05g009980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 4183454-4185453 Solanum lycopersicum
Solyc05g009980.2 2.0kb downstream 2.0kb downstream 9280 true SL2.50ch05: 4174174-4183453 Solanum lycopersicum
Solyc05g009980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 4174174-4176173 Solanum lycopersicum
Solyc05g009980.2 5.0kb upstream 5.0kb upstream 12280 true SL2.50ch05: 4176174-4188453 Solanum lycopersicum
Solyc05g009980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 4183454-4188453 Solanum lycopersicum
Solyc05g009980.2 5.0kb downstream 5.0kb downstream 12280 true SL2.50ch05: 4171174-4183453 Solanum lycopersicum
Solyc05g009980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 4171174-4176173 Solanum lycopersicum
Solyc05g009980.2 10.0kb upstream 10.0kb upstream 17280 true SL2.50ch05: 4176174-4193453 Solanum lycopersicum
Solyc05g009980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 4183454-4193453 Solanum lycopersicum
Solyc05g009980.2 10.0kb downstream 10.0kb downstream 17280 true SL2.50ch05: 4166174-4183453 Solanum lycopersicum
Solyc05g009980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 4166174-4176173 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468754 5263 Asterids View MSA
123751625 5271 Pentapetalae View MSA
122797908 5272 Eudicot View MSA
122051702 5273 Angiosperm View MSA
121348013 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain