Gene : Solyc05g013990.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K09497 - T-complex protein 1 subunit epsilon (CCT5) Description:  T-complex protein 1 subunit epsilon (AHRD V1 ***- B6TSC6_MAIZE); contains Interpro domain(s) IPR012718 T-complex protein 1, epsilon subunit
Genomic Order:  797 Name:  ? Solyc05g013990.2
Secondary Identifier:  ? PAC:36145163
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g013990.2 0.5kb upstream 0.5kb upstream 7954 true SL2.50ch05: 7491970-7499923 Solanum lycopersicum
Solyc05g013990.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 7491970-7492469 Solanum lycopersicum
Solyc05g013990.2 0.5kb downstream 0.5kb downstream 7954 true SL2.50ch05: 7492470-7500423 Solanum lycopersicum
Solyc05g013990.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 7499924-7500423 Solanum lycopersicum
Solyc05g013990.2 1.0kb upstream 1.0kb upstream 8454 true SL2.50ch05: 7491470-7499923 Solanum lycopersicum
Solyc05g013990.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 7491470-7492469 Solanum lycopersicum
Solyc05g013990.2 1.0kb downstream 1.0kb downstream 8454 true SL2.50ch05: 7492470-7500923 Solanum lycopersicum
Solyc05g013990.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 7499924-7500923 Solanum lycopersicum
Solyc05g013990.2 2.0kb upstream 2.0kb upstream 9454 true SL2.50ch05: 7490470-7499923 Solanum lycopersicum
Solyc05g013990.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 7490470-7492469 Solanum lycopersicum
Solyc05g013990.2 2.0kb downstream 2.0kb downstream 9454 true SL2.50ch05: 7492470-7501923 Solanum lycopersicum
Solyc05g013990.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 7499924-7501923 Solanum lycopersicum
Solyc05g013990.2 5.0kb upstream 5.0kb upstream 12454 true SL2.50ch05: 7487470-7499923 Solanum lycopersicum
Solyc05g013990.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 7487470-7492469 Solanum lycopersicum
Solyc05g013990.2 5.0kb downstream 5.0kb downstream 12454 true SL2.50ch05: 7492470-7504923 Solanum lycopersicum
Solyc05g013990.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 7499924-7504923 Solanum lycopersicum
Solyc05g013990.2 10.0kb upstream 10.0kb upstream 17454 true SL2.50ch05: 7482470-7499923 Solanum lycopersicum
Solyc05g013990.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 7482470-7492469 Solanum lycopersicum
Solyc05g013990.2 10.0kb downstream 10.0kb downstream 17454 true SL2.50ch05: 7492470-7509923 Solanum lycopersicum
Solyc05g013990.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 7499924-7509923 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471530 5263 Asterids View MSA
123739090 5271 Pentapetalae View MSA
122792390 5272 Eudicot View MSA
122043511 5273 Angiosperm View MSA
121350582 5274 Embryophyte View MSA
123425092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain