Gene : Solyc06g008140.1 S. lycopersicum ITAG2.4
Defline:  (1 of 9) PTHR12220:SF15 - 60S RIBOSOMAL PROTEIN L16, MITOCHONDRIAL Description:  50S ribosomal protein L16 (AHRD V1 ***- Q0G7G8_9RHIZ); contains Interpro domain(s) IPR000114 Ribosomal protein L16
Genomic Order:  215 Name:  ? Solyc06g008140.1
Secondary Identifier:  ? PAC:36128781
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g008140.1 0.5kb upstream 0.5kb upstream 725 true SL2.50ch06: 2015643-2016367 Solanum lycopersicum
Solyc06g008140.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 2015868-2016367 Solanum lycopersicum
Solyc06g008140.1 0.5kb downstream 0.5kb downstream 725 true SL2.50ch06: 2015143-2015867 Solanum lycopersicum
Solyc06g008140.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 2015143-2015642 Solanum lycopersicum
Solyc06g008140.1 1.0kb upstream 1.0kb upstream 1225 true SL2.50ch06: 2015643-2016867 Solanum lycopersicum
Solyc06g008140.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 2015868-2016867 Solanum lycopersicum
Solyc06g008140.1 1.0kb downstream 1.0kb downstream 1225 true SL2.50ch06: 2014643-2015867 Solanum lycopersicum
Solyc06g008140.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 2014643-2015642 Solanum lycopersicum
Solyc06g008140.1 2.0kb upstream 2.0kb upstream 2225 true SL2.50ch06: 2015643-2017867 Solanum lycopersicum
Solyc06g008140.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 2015868-2017867 Solanum lycopersicum
Solyc06g008140.1 2.0kb downstream 2.0kb downstream 2225 true SL2.50ch06: 2013643-2015867 Solanum lycopersicum
Solyc06g008140.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 2013643-2015642 Solanum lycopersicum
Solyc06g008140.1 5.0kb upstream 5.0kb upstream 5225 true SL2.50ch06: 2015643-2020867 Solanum lycopersicum
Solyc06g008140.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 2015868-2020867 Solanum lycopersicum
Solyc06g008140.1 5.0kb downstream 5.0kb downstream 5225 true SL2.50ch06: 2010643-2015867 Solanum lycopersicum
Solyc06g008140.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 2010643-2015642 Solanum lycopersicum
Solyc06g008140.1 10.0kb upstream 10.0kb upstream 10225 true SL2.50ch06: 2015643-2025867 Solanum lycopersicum
Solyc06g008140.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 2015868-2025867 Solanum lycopersicum
Solyc06g008140.1 10.0kb downstream 10.0kb downstream 10225 true SL2.50ch06: 2005643-2015867 Solanum lycopersicum
Solyc06g008140.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 2005643-2015642 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121368117 5263 Asterids Singleton cluster - no MSA
123748871 5271 Pentapetalae View MSA
122796002 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain