Gene : Solyc06g007140.2 S. lycopersicum ITAG2.4
Defline:  (1 of 11) PF11960 - Domain of unknown function (DUF3474) (DUF3474) Description:  Omega-3 fatty acid desaturase (AHRD V1 **** A9LNM9_SOLLC); contains Interpro domain(s) IPR005804 Fatty acid desaturase, type 1
Genomic Order:  116 Name:  ? Solyc06g007140.2
Secondary Identifier:  ? PAC:36129134
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g007140.2 0.5kb upstream 0.5kb upstream 3970 true SL2.50ch06: 1189570-1193539 Solanum lycopersicum
Solyc06g007140.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 1193040-1193539 Solanum lycopersicum
Solyc06g007140.2 0.5kb downstream 0.5kb downstream 3970 true SL2.50ch06: 1189070-1193039 Solanum lycopersicum
Solyc06g007140.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 1189070-1189569 Solanum lycopersicum
Solyc06g007140.2 1.0kb upstream 1.0kb upstream 4470 true SL2.50ch06: 1189570-1194039 Solanum lycopersicum
Solyc06g007140.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 1193040-1194039 Solanum lycopersicum
Solyc06g007140.2 1.0kb downstream 1.0kb downstream 4470 true SL2.50ch06: 1188570-1193039 Solanum lycopersicum
Solyc06g007140.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 1188570-1189569 Solanum lycopersicum
Solyc06g007140.2 2.0kb upstream 2.0kb upstream 5470 true SL2.50ch06: 1189570-1195039 Solanum lycopersicum
Solyc06g007140.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 1193040-1195039 Solanum lycopersicum
Solyc06g007140.2 2.0kb downstream 2.0kb downstream 5470 true SL2.50ch06: 1187570-1193039 Solanum lycopersicum
Solyc06g007140.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 1187570-1189569 Solanum lycopersicum
Solyc06g007140.2 5.0kb upstream 5.0kb upstream 8470 true SL2.50ch06: 1189570-1198039 Solanum lycopersicum
Solyc06g007140.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 1193040-1198039 Solanum lycopersicum
Solyc06g007140.2 5.0kb downstream 5.0kb downstream 8470 true SL2.50ch06: 1184570-1193039 Solanum lycopersicum
Solyc06g007140.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 1184570-1189569 Solanum lycopersicum
Solyc06g007140.2 10.0kb upstream 10.0kb upstream 13470 true SL2.50ch06: 1189570-1203039 Solanum lycopersicum
Solyc06g007140.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 1193040-1203039 Solanum lycopersicum
Solyc06g007140.2 10.0kb downstream 10.0kb downstream 13470 true SL2.50ch06: 1179570-1193039 Solanum lycopersicum
Solyc06g007140.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 1179570-1189569 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482292 5263 Asterids View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain