Gene : Solyc06g007110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG2401 - Predicted MutS-related protein involved in mismatch repair Description:  Smr domain protein (AHRD V1 *--- B0XRA1_ASPFC); contains Interpro domain(s) IPR013899 Region of unknown function DUF1771
Genomic Order:  113 Name:  ? Solyc06g007110.2
Secondary Identifier:  ? PAC:36130564
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g007110.2 0.5kb upstream 0.5kb upstream 7291 true SL2.50ch06: 1157031-1164321 Solanum lycopersicum
Solyc06g007110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 1157031-1157530 Solanum lycopersicum
Solyc06g007110.2 0.5kb downstream 0.5kb downstream 7291 true SL2.50ch06: 1157531-1164821 Solanum lycopersicum
Solyc06g007110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 1164322-1164821 Solanum lycopersicum
Solyc06g007110.2 1.0kb upstream 1.0kb upstream 7791 true SL2.50ch06: 1156531-1164321 Solanum lycopersicum
Solyc06g007110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 1156531-1157530 Solanum lycopersicum
Solyc06g007110.2 1.0kb downstream 1.0kb downstream 7791 true SL2.50ch06: 1157531-1165321 Solanum lycopersicum
Solyc06g007110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 1164322-1165321 Solanum lycopersicum
Solyc06g007110.2 2.0kb upstream 2.0kb upstream 8791 true SL2.50ch06: 1155531-1164321 Solanum lycopersicum
Solyc06g007110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 1155531-1157530 Solanum lycopersicum
Solyc06g007110.2 2.0kb downstream 2.0kb downstream 8791 true SL2.50ch06: 1157531-1166321 Solanum lycopersicum
Solyc06g007110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 1164322-1166321 Solanum lycopersicum
Solyc06g007110.2 5.0kb upstream 5.0kb upstream 11791 true SL2.50ch06: 1152531-1164321 Solanum lycopersicum
Solyc06g007110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 1152531-1157530 Solanum lycopersicum
Solyc06g007110.2 5.0kb downstream 5.0kb downstream 11791 true SL2.50ch06: 1157531-1169321 Solanum lycopersicum
Solyc06g007110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 1164322-1169321 Solanum lycopersicum
Solyc06g007110.2 10.0kb upstream 10.0kb upstream 16791 true SL2.50ch06: 1147531-1164321 Solanum lycopersicum
Solyc06g007110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 1147531-1157530 Solanum lycopersicum
Solyc06g007110.2 10.0kb downstream 10.0kb downstream 16791 true SL2.50ch06: 1157531-1174321 Solanum lycopersicum
Solyc06g007110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 1164322-1174321 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466367 5263 Asterids View MSA
123747200 5271 Pentapetalae View MSA
122786859 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain