Gene : Solyc06g053390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR23180:SF289 - CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN Description:  C2 domain-containing protein (AHRD V1 **-- D7LLS3_ARALY); contains Interpro domain(s) IPR018029 C2 membrane targeting protein
Genomic Order:  1101 Name:  ? Solyc06g053390.2
Secondary Identifier:  ? PAC:36129243
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g053390.2 0.5kb upstream 0.5kb upstream 2058 true SL2.50ch06: 36157640-36159697 Solanum lycopersicum
Solyc06g053390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 36157640-36158139 Solanum lycopersicum
Solyc06g053390.2 0.5kb downstream 0.5kb downstream 2058 true SL2.50ch06: 36158140-36160197 Solanum lycopersicum
Solyc06g053390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 36159698-36160197 Solanum lycopersicum
Solyc06g053390.2 1.0kb upstream 1.0kb upstream 2558 true SL2.50ch06: 36157140-36159697 Solanum lycopersicum
Solyc06g053390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 36157140-36158139 Solanum lycopersicum
Solyc06g053390.2 1.0kb downstream 1.0kb downstream 2558 true SL2.50ch06: 36158140-36160697 Solanum lycopersicum
Solyc06g053390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 36159698-36160697 Solanum lycopersicum
Solyc06g053390.2 2.0kb upstream 2.0kb upstream 3558 true SL2.50ch06: 36156140-36159697 Solanum lycopersicum
Solyc06g053390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 36156140-36158139 Solanum lycopersicum
Solyc06g053390.2 2.0kb downstream 2.0kb downstream 3558 true SL2.50ch06: 36158140-36161697 Solanum lycopersicum
Solyc06g053390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 36159698-36161697 Solanum lycopersicum
Solyc06g053390.2 5.0kb upstream 5.0kb upstream 6558 true SL2.50ch06: 36153140-36159697 Solanum lycopersicum
Solyc06g053390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 36153140-36158139 Solanum lycopersicum
Solyc06g053390.2 5.0kb downstream 5.0kb downstream 6558 true SL2.50ch06: 36158140-36164697 Solanum lycopersicum
Solyc06g053390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 36159698-36164697 Solanum lycopersicum
Solyc06g053390.2 10.0kb upstream 10.0kb upstream 11558 true SL2.50ch06: 36148140-36159697 Solanum lycopersicum
Solyc06g053390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 36148140-36158139 Solanum lycopersicum
Solyc06g053390.2 10.0kb downstream 10.0kb downstream 11558 true SL2.50ch06: 36158140-36169697 Solanum lycopersicum
Solyc06g053390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 36159698-36169697 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473621 5263 Asterids View MSA
123750672 5271 Pentapetalae View MSA
122773790 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain