Gene : Solyc06g073870.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) Description:  DNA-directed RNA polymerase II subunit RPB4 (AHRD V1 **** B9EP00_SALSA); contains Interpro domain(s) IPR006590 RNA polymerase II, Rpb4, core
Genomic Order:  2241 Name:  ? Solyc06g073870.2
Secondary Identifier:  ? PAC:36129859
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g073870.2 0.5kb upstream 0.5kb upstream 3227 true SL2.50ch06: 45612958-45616184 Solanum lycopersicum
Solyc06g073870.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 45615685-45616184 Solanum lycopersicum
Solyc06g073870.2 0.5kb downstream 0.5kb downstream 3227 true SL2.50ch06: 45612458-45615684 Solanum lycopersicum
Solyc06g073870.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 45612458-45612957 Solanum lycopersicum
Solyc06g073870.2 1.0kb upstream 1.0kb upstream 3727 true SL2.50ch06: 45612958-45616684 Solanum lycopersicum
Solyc06g073870.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 45615685-45616684 Solanum lycopersicum
Solyc06g073870.2 1.0kb downstream 1.0kb downstream 3727 true SL2.50ch06: 45611958-45615684 Solanum lycopersicum
Solyc06g073870.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 45611958-45612957 Solanum lycopersicum
Solyc06g073870.2 2.0kb upstream 2.0kb upstream 4727 true SL2.50ch06: 45612958-45617684 Solanum lycopersicum
Solyc06g073870.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 45615685-45617684 Solanum lycopersicum
Solyc06g073870.2 2.0kb downstream 2.0kb downstream 4727 true SL2.50ch06: 45610958-45615684 Solanum lycopersicum
Solyc06g073870.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 45610958-45612957 Solanum lycopersicum
Solyc06g073870.2 5.0kb upstream 5.0kb upstream 7727 true SL2.50ch06: 45612958-45620684 Solanum lycopersicum
Solyc06g073870.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 45615685-45620684 Solanum lycopersicum
Solyc06g073870.2 5.0kb downstream 5.0kb downstream 7727 true SL2.50ch06: 45607958-45615684 Solanum lycopersicum
Solyc06g073870.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 45607958-45612957 Solanum lycopersicum
Solyc06g073870.2 10.0kb upstream 10.0kb upstream 12727 true SL2.50ch06: 45612958-45625684 Solanum lycopersicum
Solyc06g073870.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 45615685-45625684 Solanum lycopersicum
Solyc06g073870.2 10.0kb downstream 10.0kb downstream 12727 true SL2.50ch06: 45602958-45615684 Solanum lycopersicum
Solyc06g073870.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 45602958-45612957 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472582 5263 Asterids View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain