Gene : Solyc06g073090.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR33231:SF1 - 30S RIBOSOMAL PROTEIN-RELATED Description:  Ribosomal subunit interface protein (AHRD V1 **-- Q2JIS4_SYNJB); contains Interpro domain(s) IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein
Genomic Order:  2163 Name:  ? Solyc06g073090.2
Secondary Identifier:  ? PAC:36129881
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g073090.2 0.5kb upstream 0.5kb upstream 4310 true SL2.50ch06: 45027154-45031463 Solanum lycopersicum
Solyc06g073090.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 45027154-45027653 Solanum lycopersicum
Solyc06g073090.2 0.5kb downstream 0.5kb downstream 4310 true SL2.50ch06: 45027654-45031963 Solanum lycopersicum
Solyc06g073090.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 45031464-45031963 Solanum lycopersicum
Solyc06g073090.2 1.0kb upstream 1.0kb upstream 4810 true SL2.50ch06: 45026654-45031463 Solanum lycopersicum
Solyc06g073090.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 45026654-45027653 Solanum lycopersicum
Solyc06g073090.2 1.0kb downstream 1.0kb downstream 4810 true SL2.50ch06: 45027654-45032463 Solanum lycopersicum
Solyc06g073090.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 45031464-45032463 Solanum lycopersicum
Solyc06g073090.2 2.0kb upstream 2.0kb upstream 5810 true SL2.50ch06: 45025654-45031463 Solanum lycopersicum
Solyc06g073090.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 45025654-45027653 Solanum lycopersicum
Solyc06g073090.2 2.0kb downstream 2.0kb downstream 5810 true SL2.50ch06: 45027654-45033463 Solanum lycopersicum
Solyc06g073090.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 45031464-45033463 Solanum lycopersicum
Solyc06g073090.2 5.0kb upstream 5.0kb upstream 8810 true SL2.50ch06: 45022654-45031463 Solanum lycopersicum
Solyc06g073090.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 45022654-45027653 Solanum lycopersicum
Solyc06g073090.2 5.0kb downstream 5.0kb downstream 8810 true SL2.50ch06: 45027654-45036463 Solanum lycopersicum
Solyc06g073090.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 45031464-45036463 Solanum lycopersicum
Solyc06g073090.2 10.0kb upstream 10.0kb upstream 13810 true SL2.50ch06: 45017654-45031463 Solanum lycopersicum
Solyc06g073090.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 45017654-45027653 Solanum lycopersicum
Solyc06g073090.2 10.0kb downstream 10.0kb downstream 13810 true SL2.50ch06: 45027654-45041463 Solanum lycopersicum
Solyc06g073090.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 45031464-45041463 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478671 5263 Asterids View MSA
123738015 5271 Pentapetalae View MSA
122786116 5272 Eudicot View MSA
122044034 5273 Angiosperm View MSA
121345807 5274 Embryophyte View MSA
123423894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain