Gene : Solyc06g071680.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10625:SF109 - HISTONE DEACETYLASE 2 Description:  Histone deacetylase (AHRD V1 ***- B9I3D0_POPTR); contains Interpro domain(s) IPR003084 Histone deacetylase
Genomic Order:  2023 Name:  ? Solyc06g071680.2
Secondary Identifier:  ? PAC:36130992
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g071680.2 0.5kb upstream 0.5kb upstream 5005 true SL2.50ch06: 44145599-44150603 Solanum lycopersicum
Solyc06g071680.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 44150104-44150603 Solanum lycopersicum
Solyc06g071680.2 0.5kb downstream 0.5kb downstream 5005 true SL2.50ch06: 44145099-44150103 Solanum lycopersicum
Solyc06g071680.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 44145099-44145598 Solanum lycopersicum
Solyc06g071680.2 1.0kb upstream 1.0kb upstream 5505 true SL2.50ch06: 44145599-44151103 Solanum lycopersicum
Solyc06g071680.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 44150104-44151103 Solanum lycopersicum
Solyc06g071680.2 1.0kb downstream 1.0kb downstream 5505 true SL2.50ch06: 44144599-44150103 Solanum lycopersicum
Solyc06g071680.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 44144599-44145598 Solanum lycopersicum
Solyc06g071680.2 2.0kb upstream 2.0kb upstream 6505 true SL2.50ch06: 44145599-44152103 Solanum lycopersicum
Solyc06g071680.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 44150104-44152103 Solanum lycopersicum
Solyc06g071680.2 2.0kb downstream 2.0kb downstream 6505 true SL2.50ch06: 44143599-44150103 Solanum lycopersicum
Solyc06g071680.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 44143599-44145598 Solanum lycopersicum
Solyc06g071680.2 5.0kb upstream 5.0kb upstream 9505 true SL2.50ch06: 44145599-44155103 Solanum lycopersicum
Solyc06g071680.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 44150104-44155103 Solanum lycopersicum
Solyc06g071680.2 5.0kb downstream 5.0kb downstream 9505 true SL2.50ch06: 44140599-44150103 Solanum lycopersicum
Solyc06g071680.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 44140599-44145598 Solanum lycopersicum
Solyc06g071680.2 10.0kb upstream 10.0kb upstream 14505 true SL2.50ch06: 44145599-44160103 Solanum lycopersicum
Solyc06g071680.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 44150104-44160103 Solanum lycopersicum
Solyc06g071680.2 10.0kb downstream 10.0kb downstream 14505 true SL2.50ch06: 44135599-44150103 Solanum lycopersicum
Solyc06g071680.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 44135599-44145598 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470180 5263 Asterids View MSA
123739181 5271 Pentapetalae View MSA
122793784 5272 Eudicot View MSA
122043471 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain