Gene : Solyc06g076970.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Description:  Peptidyl-prolyl cis-trans isomerase (AHRD V1 **** B2BF99_TOBAC); contains Interpro domain(s) IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Genomic Order:  2548 Name:  ? Solyc06g076970.2
Secondary Identifier:  ? PAC:36129410
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc06g076970.2 0.5kb upstream 0.5kb upstream 4313 true SL2.50ch06: 47833488-47837800 Solanum lycopersicum
Solyc06g076970.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch06: 47837301-47837800 Solanum lycopersicum
Solyc06g076970.2 0.5kb downstream 0.5kb downstream 4313 true SL2.50ch06: 47832988-47837300 Solanum lycopersicum
Solyc06g076970.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch06: 47832988-47833487 Solanum lycopersicum
Solyc06g076970.2 1.0kb upstream 1.0kb upstream 4813 true SL2.50ch06: 47833488-47838300 Solanum lycopersicum
Solyc06g076970.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch06: 47837301-47838300 Solanum lycopersicum
Solyc06g076970.2 1.0kb downstream 1.0kb downstream 4813 true SL2.50ch06: 47832488-47837300 Solanum lycopersicum
Solyc06g076970.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch06: 47832488-47833487 Solanum lycopersicum
Solyc06g076970.2 2.0kb upstream 2.0kb upstream 5813 true SL2.50ch06: 47833488-47839300 Solanum lycopersicum
Solyc06g076970.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch06: 47837301-47839300 Solanum lycopersicum
Solyc06g076970.2 2.0kb downstream 2.0kb downstream 5813 true SL2.50ch06: 47831488-47837300 Solanum lycopersicum
Solyc06g076970.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch06: 47831488-47833487 Solanum lycopersicum
Solyc06g076970.2 5.0kb upstream 5.0kb upstream 8813 true SL2.50ch06: 47833488-47842300 Solanum lycopersicum
Solyc06g076970.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch06: 47837301-47842300 Solanum lycopersicum
Solyc06g076970.2 5.0kb downstream 5.0kb downstream 8813 true SL2.50ch06: 47828488-47837300 Solanum lycopersicum
Solyc06g076970.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch06: 47828488-47833487 Solanum lycopersicum
Solyc06g076970.2 10.0kb upstream 10.0kb upstream 13813 true SL2.50ch06: 47833488-47847300 Solanum lycopersicum
Solyc06g076970.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch06: 47837301-47847300 Solanum lycopersicum
Solyc06g076970.2 10.0kb downstream 10.0kb downstream 13813 true SL2.50ch06: 47823488-47837300 Solanum lycopersicum
Solyc06g076970.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch06: 47823488-47833487 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481224 5263 Asterids View MSA
123745258 5271 Pentapetalae View MSA
122785870 5272 Eudicot View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain