Gene : Solyc11g005650.1 S. lycopersicum ITAG2.4
Defline:  (1 of 9) KOG0001//KOG0005 - Ubiquitin and ubiquitin-like proteins // Ubiquitin-like protein Description:  Ubiquitin (AHRD V1 ***- Q2HTU3_MEDTR); contains Interpro domain(s) IPR019956 Ubiquitin subgroup
Genomic Order:  66 Name:  ? Solyc11g005650.1
Secondary Identifier:  ? PAC:36153188
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g005650.1 0.5kb upstream 0.5kb upstream 2145 true SL2.50ch11: 487487-489631 Solanum lycopersicum
Solyc11g005650.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 489132-489631 Solanum lycopersicum
Solyc11g005650.1 0.5kb downstream 0.5kb downstream 2145 true SL2.50ch11: 486987-489131 Solanum lycopersicum
Solyc11g005650.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 486987-487486 Solanum lycopersicum
Solyc11g005650.1 1.0kb upstream 1.0kb upstream 2645 true SL2.50ch11: 487487-490131 Solanum lycopersicum
Solyc11g005650.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 489132-490131 Solanum lycopersicum
Solyc11g005650.1 1.0kb downstream 1.0kb downstream 2645 true SL2.50ch11: 486487-489131 Solanum lycopersicum
Solyc11g005650.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 486487-487486 Solanum lycopersicum
Solyc11g005650.1 2.0kb upstream 2.0kb upstream 3645 true SL2.50ch11: 487487-491131 Solanum lycopersicum
Solyc11g005650.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 489132-491131 Solanum lycopersicum
Solyc11g005650.1 2.0kb downstream 2.0kb downstream 3645 true SL2.50ch11: 485487-489131 Solanum lycopersicum
Solyc11g005650.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 485487-487486 Solanum lycopersicum
Solyc11g005650.1 5.0kb upstream 5.0kb upstream 6645 true SL2.50ch11: 487487-494131 Solanum lycopersicum
Solyc11g005650.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 489132-494131 Solanum lycopersicum
Solyc11g005650.1 5.0kb downstream 5.0kb downstream 6645 true SL2.50ch11: 482487-489131 Solanum lycopersicum
Solyc11g005650.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 482487-487486 Solanum lycopersicum
Solyc11g005650.1 10.0kb upstream 10.0kb upstream 11645 true SL2.50ch11: 487487-499131 Solanum lycopersicum
Solyc11g005650.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 489132-499131 Solanum lycopersicum
Solyc11g005650.1 10.0kb downstream 10.0kb downstream 11645 true SL2.50ch11: 477487-489131 Solanum lycopersicum
Solyc11g005650.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 477487-487486 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389928 5263 Asterids View MSA
123754617 5271 Pentapetalae View MSA
122775977 5272 Eudicot View MSA
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain