Gene : Solyc11g005250.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 Description:  DNA repair protein RAD5 (AHRD V1 *--- C5FVY4_NANOT); contains Interpro domain(s) IPR011124 Zinc finger, CW-type
Genomic Order:  26 Name:  ? Solyc11g005250.1
Secondary Identifier:  ? PAC:36153737
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g005250.1 0.5kb upstream 0.5kb upstream 9836 true SL2.50ch11: 202911-212746 Solanum lycopersicum
Solyc11g005250.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 212247-212746 Solanum lycopersicum
Solyc11g005250.1 0.5kb downstream 0.5kb downstream 9836 true SL2.50ch11: 202411-212246 Solanum lycopersicum
Solyc11g005250.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 202411-202910 Solanum lycopersicum
Solyc11g005250.1 1.0kb upstream 1.0kb upstream 10336 true SL2.50ch11: 202911-213246 Solanum lycopersicum
Solyc11g005250.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 212247-213246 Solanum lycopersicum
Solyc11g005250.1 1.0kb downstream 1.0kb downstream 10336 true SL2.50ch11: 201911-212246 Solanum lycopersicum
Solyc11g005250.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 201911-202910 Solanum lycopersicum
Solyc11g005250.1 2.0kb upstream 2.0kb upstream 11336 true SL2.50ch11: 202911-214246 Solanum lycopersicum
Solyc11g005250.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 212247-214246 Solanum lycopersicum
Solyc11g005250.1 2.0kb downstream 2.0kb downstream 11336 true SL2.50ch11: 200911-212246 Solanum lycopersicum
Solyc11g005250.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 200911-202910 Solanum lycopersicum
Solyc11g005250.1 5.0kb upstream 5.0kb upstream 14336 true SL2.50ch11: 202911-217246 Solanum lycopersicum
Solyc11g005250.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 212247-217246 Solanum lycopersicum
Solyc11g005250.1 5.0kb downstream 5.0kb downstream 14336 true SL2.50ch11: 197911-212246 Solanum lycopersicum
Solyc11g005250.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 197911-202910 Solanum lycopersicum
Solyc11g005250.1 10.0kb upstream 10.0kb upstream 19336 true SL2.50ch11: 202911-222246 Solanum lycopersicum
Solyc11g005250.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 212247-222246 Solanum lycopersicum
Solyc11g005250.1 10.0kb downstream 10.0kb downstream 19336 true SL2.50ch11: 192911-212246 Solanum lycopersicum
Solyc11g005250.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 192911-202910 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471142 5263 Asterids View MSA
123738895 5271 Pentapetalae View MSA
122788096 5272 Eudicot View MSA
122041978 5273 Angiosperm View MSA
121346055 5274 Embryophyte View MSA
123424068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain