Gene : Solyc11g012100.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 2.1.2.2 - Phosphoribosylglycinamide formyltransferase / Glycinamide ribonucleotide transformylase Description:  Phosphoribosylglycinamide formyltransferase (AHRD V1 ***- D7KK96_ARALY); contains Interpro domain(s) IPR002376 Formyl transferase, N-terminal
Genomic Order:  606 Name:  ? Solyc11g012100.1
Secondary Identifier:  ? PAC:36152568
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6121 Solanum lycopersicum pathologic  
Slycopersicum PWY-6613 Solanum lycopersicum pathologic  
Slycopersicum PWY-841 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g012100.1 0.5kb upstream 0.5kb upstream 5202 true SL2.50ch11: 5030594-5035795 Solanum lycopersicum
Solyc11g012100.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 5030594-5031093 Solanum lycopersicum
Solyc11g012100.1 0.5kb downstream 0.5kb downstream 5202 true SL2.50ch11: 5031094-5036295 Solanum lycopersicum
Solyc11g012100.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 5035796-5036295 Solanum lycopersicum
Solyc11g012100.1 1.0kb upstream 1.0kb upstream 5702 true SL2.50ch11: 5030094-5035795 Solanum lycopersicum
Solyc11g012100.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 5030094-5031093 Solanum lycopersicum
Solyc11g012100.1 1.0kb downstream 1.0kb downstream 5702 true SL2.50ch11: 5031094-5036795 Solanum lycopersicum
Solyc11g012100.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 5035796-5036795 Solanum lycopersicum
Solyc11g012100.1 2.0kb upstream 2.0kb upstream 6702 true SL2.50ch11: 5029094-5035795 Solanum lycopersicum
Solyc11g012100.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 5029094-5031093 Solanum lycopersicum
Solyc11g012100.1 2.0kb downstream 2.0kb downstream 6702 true SL2.50ch11: 5031094-5037795 Solanum lycopersicum
Solyc11g012100.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 5035796-5037795 Solanum lycopersicum
Solyc11g012100.1 5.0kb upstream 5.0kb upstream 9702 true SL2.50ch11: 5026094-5035795 Solanum lycopersicum
Solyc11g012100.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 5026094-5031093 Solanum lycopersicum
Solyc11g012100.1 5.0kb downstream 5.0kb downstream 9702 true SL2.50ch11: 5031094-5040795 Solanum lycopersicum
Solyc11g012100.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 5035796-5040795 Solanum lycopersicum
Solyc11g012100.1 10.0kb upstream 10.0kb upstream 14702 true SL2.50ch11: 5021094-5035795 Solanum lycopersicum
Solyc11g012100.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 5021094-5031093 Solanum lycopersicum
Solyc11g012100.1 10.0kb downstream 10.0kb downstream 14702 true SL2.50ch11: 5031094-5045795 Solanum lycopersicum
Solyc11g012100.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 5035796-5045795 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472971 5263 Asterids View MSA
123739815 5271 Pentapetalae View MSA
122788812 5272 Eudicot View MSA
122049914 5273 Angiosperm View MSA
121349551 5274 Embryophyte View MSA
123426469 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain