Gene : Solyc11g019960.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12507 - REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED Description:  Retrograde Golgi transport protein RGP1 homolog (AHRD V1 *--- RGP1_HUMAN); contains Interpro domain(s) IPR014756 Immunoglobulin E-set
Genomic Order:  891 Name:  ? Solyc11g019960.1
Secondary Identifier:  ? PAC:36152354
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g019960.1 0.5kb upstream 0.5kb upstream 12202 true SL2.50ch11: 9826267-9838468 Solanum lycopersicum
Solyc11g019960.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 9837969-9838468 Solanum lycopersicum
Solyc11g019960.1 0.5kb downstream 0.5kb downstream 12202 true SL2.50ch11: 9825767-9837968 Solanum lycopersicum
Solyc11g019960.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 9825767-9826266 Solanum lycopersicum
Solyc11g019960.1 1.0kb upstream 1.0kb upstream 12702 true SL2.50ch11: 9826267-9838968 Solanum lycopersicum
Solyc11g019960.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 9837969-9838968 Solanum lycopersicum
Solyc11g019960.1 1.0kb downstream 1.0kb downstream 12702 true SL2.50ch11: 9825267-9837968 Solanum lycopersicum
Solyc11g019960.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 9825267-9826266 Solanum lycopersicum
Solyc11g019960.1 2.0kb upstream 2.0kb upstream 13702 true SL2.50ch11: 9826267-9839968 Solanum lycopersicum
Solyc11g019960.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 9837969-9839968 Solanum lycopersicum
Solyc11g019960.1 2.0kb downstream 2.0kb downstream 13702 true SL2.50ch11: 9824267-9837968 Solanum lycopersicum
Solyc11g019960.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 9824267-9826266 Solanum lycopersicum
Solyc11g019960.1 5.0kb upstream 5.0kb upstream 16702 true SL2.50ch11: 9826267-9842968 Solanum lycopersicum
Solyc11g019960.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 9837969-9842968 Solanum lycopersicum
Solyc11g019960.1 5.0kb downstream 5.0kb downstream 16702 true SL2.50ch11: 9821267-9837968 Solanum lycopersicum
Solyc11g019960.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 9821267-9826266 Solanum lycopersicum
Solyc11g019960.1 10.0kb upstream 10.0kb upstream 21702 true SL2.50ch11: 9826267-9847968 Solanum lycopersicum
Solyc11g019960.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 9837969-9847968 Solanum lycopersicum
Solyc11g019960.1 10.0kb downstream 10.0kb downstream 21702 true SL2.50ch11: 9816267-9837968 Solanum lycopersicum
Solyc11g019960.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 9816267-9826266 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475758 5263 Asterids View MSA
123737119 5271 Pentapetalae View MSA
122786720 5272 Eudicot View MSA
122045159 5273 Angiosperm View MSA
123428887 5275 Viridiplantae View MSA
121345368 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain