Gene : Solyc11g020300.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22904:SF373 - PROTEIN TIC 40, CHLOROPLASTIC Description:  Translocon Tic40 (AHRD V1 ***- Q9SC41_PEA); contains Interpro domain(s) IPR006636 Heat shock chaperonin-binding
Genomic Order:  924 Name:  ? Solyc11g020300.1
Secondary Identifier:  ? PAC:36153506
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g020300.1 0.5kb upstream 0.5kb upstream 13296 true SL2.50ch11: 10728385-10741680 Solanum lycopersicum
Solyc11g020300.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 10741181-10741680 Solanum lycopersicum
Solyc11g020300.1 0.5kb downstream 0.5kb downstream 13296 true SL2.50ch11: 10727885-10741180 Solanum lycopersicum
Solyc11g020300.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 10727885-10728384 Solanum lycopersicum
Solyc11g020300.1 1.0kb upstream 1.0kb upstream 13796 true SL2.50ch11: 10728385-10742180 Solanum lycopersicum
Solyc11g020300.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 10741181-10742180 Solanum lycopersicum
Solyc11g020300.1 1.0kb downstream 1.0kb downstream 13796 true SL2.50ch11: 10727385-10741180 Solanum lycopersicum
Solyc11g020300.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 10727385-10728384 Solanum lycopersicum
Solyc11g020300.1 2.0kb upstream 2.0kb upstream 14796 true SL2.50ch11: 10728385-10743180 Solanum lycopersicum
Solyc11g020300.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 10741181-10743180 Solanum lycopersicum
Solyc11g020300.1 2.0kb downstream 2.0kb downstream 14796 true SL2.50ch11: 10726385-10741180 Solanum lycopersicum
Solyc11g020300.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 10726385-10728384 Solanum lycopersicum
Solyc11g020300.1 5.0kb upstream 5.0kb upstream 17796 true SL2.50ch11: 10728385-10746180 Solanum lycopersicum
Solyc11g020300.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 10741181-10746180 Solanum lycopersicum
Solyc11g020300.1 5.0kb downstream 5.0kb downstream 17796 true SL2.50ch11: 10723385-10741180 Solanum lycopersicum
Solyc11g020300.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 10723385-10728384 Solanum lycopersicum
Solyc11g020300.1 10.0kb upstream 10.0kb upstream 22796 true SL2.50ch11: 10728385-10751180 Solanum lycopersicum
Solyc11g020300.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 10741181-10751180 Solanum lycopersicum
Solyc11g020300.1 10.0kb downstream 10.0kb downstream 22796 true SL2.50ch11: 10718385-10741180 Solanum lycopersicum
Solyc11g020300.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 10718385-10728384 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476382 5263 Asterids View MSA
123738700 5271 Pentapetalae View MSA
122785851 5272 Eudicot View MSA
122043574 5273 Angiosperm View MSA
121344558 5274 Embryophyte View MSA
123424576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain