Gene : Solyc11g020470.1 S. lycopersicum ITAG2.4
Defline:  (1 of 7) 2.1.1.112 - Glucuronoxylan 4-O-methyltransferase Description:  Expressed protein (Fragment) (AHRD V1 *-*- B3VV28_POPTN); contains Interpro domain(s) IPR006514 Protein of unknown function DUF579, plant
Genomic Order:  941 Name:  ? Solyc11g020470.1
Secondary Identifier:  ? PAC:36152683
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g020470.1 0.5kb upstream 0.5kb upstream 956 true SL2.50ch11: 11130112-11131067 Solanum lycopersicum
Solyc11g020470.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 11130568-11131067 Solanum lycopersicum
Solyc11g020470.1 0.5kb downstream 0.5kb downstream 956 true SL2.50ch11: 11129612-11130567 Solanum lycopersicum
Solyc11g020470.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 11129612-11130111 Solanum lycopersicum
Solyc11g020470.1 1.0kb upstream 1.0kb upstream 1456 true SL2.50ch11: 11130112-11131567 Solanum lycopersicum
Solyc11g020470.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 11130568-11131567 Solanum lycopersicum
Solyc11g020470.1 1.0kb downstream 1.0kb downstream 1456 true SL2.50ch11: 11129112-11130567 Solanum lycopersicum
Solyc11g020470.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 11129112-11130111 Solanum lycopersicum
Solyc11g020470.1 2.0kb upstream 2.0kb upstream 2456 true SL2.50ch11: 11130112-11132567 Solanum lycopersicum
Solyc11g020470.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 11130568-11132567 Solanum lycopersicum
Solyc11g020470.1 2.0kb downstream 2.0kb downstream 2456 true SL2.50ch11: 11128112-11130567 Solanum lycopersicum
Solyc11g020470.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 11128112-11130111 Solanum lycopersicum
Solyc11g020470.1 5.0kb upstream 5.0kb upstream 5456 true SL2.50ch11: 11130112-11135567 Solanum lycopersicum
Solyc11g020470.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 11130568-11135567 Solanum lycopersicum
Solyc11g020470.1 5.0kb downstream 5.0kb downstream 5456 true SL2.50ch11: 11125112-11130567 Solanum lycopersicum
Solyc11g020470.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 11125112-11130111 Solanum lycopersicum
Solyc11g020470.1 10.0kb upstream 10.0kb upstream 10456 true SL2.50ch11: 11130112-11140567 Solanum lycopersicum
Solyc11g020470.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 11130568-11140567 Solanum lycopersicum
Solyc11g020470.1 10.0kb downstream 10.0kb downstream 10456 true SL2.50ch11: 11120112-11130567 Solanum lycopersicum
Solyc11g020470.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 11120112-11130111 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479060 5263 Asterids View MSA
123748972 5271 Pentapetalae View MSA
122787958 5272 Eudicot View MSA
122051372 5273 Angiosperm View MSA
121312451 5274 Embryophyte View MSA
123349624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain