Gene : Solyc11g017140.1 S. lycopersicum ITAG2.4

Defline:  (1 of 5) PTHR10593//PTHR10593:SF27 - SERINE/THREONINE-PROTEIN KINASE RIO // SUBFAMILY NOT NAMED Description:  C2-H2 zinc finger protein (AHRD V1 ***- B0YR09_SOYBN); contains Interpro domain(s) IPR007087 Zinc finger, C2H2-type
Genomic Order:  809 Name:  ? Solyc11g017140.1
Secondary Identifier:  ? PAC:36153037

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g017140.1 0.5kb upstream 0.5kb upstream 1958 true SL2.50ch11: 7925834-7927791 Solanum lycopersicum
Solyc11g017140.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 7927292-7927791 Solanum lycopersicum
Solyc11g017140.1 0.5kb downstream 0.5kb downstream 1958 true SL2.50ch11: 7925334-7927291 Solanum lycopersicum
Solyc11g017140.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 7925334-7925833 Solanum lycopersicum
Solyc11g017140.1 1.0kb upstream 1.0kb upstream 2458 true SL2.50ch11: 7925834-7928291 Solanum lycopersicum
Solyc11g017140.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 7927292-7928291 Solanum lycopersicum
Solyc11g017140.1 1.0kb downstream 1.0kb downstream 2458 true SL2.50ch11: 7924834-7927291 Solanum lycopersicum
Solyc11g017140.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 7924834-7925833 Solanum lycopersicum
Solyc11g017140.1 2.0kb upstream 2.0kb upstream 3458 true SL2.50ch11: 7925834-7929291 Solanum lycopersicum
Solyc11g017140.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 7927292-7929291 Solanum lycopersicum
Solyc11g017140.1 2.0kb downstream 2.0kb downstream 3458 true SL2.50ch11: 7923834-7927291 Solanum lycopersicum
Solyc11g017140.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 7923834-7925833 Solanum lycopersicum
Solyc11g017140.1 5.0kb upstream 5.0kb upstream 6458 true SL2.50ch11: 7925834-7932291 Solanum lycopersicum
Solyc11g017140.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 7927292-7932291 Solanum lycopersicum
Solyc11g017140.1 5.0kb downstream 5.0kb downstream 6458 true SL2.50ch11: 7920834-7927291 Solanum lycopersicum
Solyc11g017140.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 7920834-7925833 Solanum lycopersicum
Solyc11g017140.1 10.0kb upstream 10.0kb upstream 11458 true SL2.50ch11: 7925834-7937291 Solanum lycopersicum
Solyc11g017140.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 7927292-7937291 Solanum lycopersicum
Solyc11g017140.1 10.0kb downstream 10.0kb downstream 11458 true SL2.50ch11: 7915834-7927291 Solanum lycopersicum
Solyc11g017140.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 7915834-7925833 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476140 5263 Asterids View MSA
123750703 5271 Pentapetalae View MSA
122786021 5272 Eudicot View MSA
122049146 5273 Angiosperm View MSA
121347779 5274 Embryophyte View MSA
123380625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain