Gene : Solyc11g040330.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR31490:SF3 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Description:  Endo-1 4-beta-xylanase (AHRD V1 **-- B6SW51_MAIZE); contains Interpro domain(s) IPR013781 Glycoside hydrolase, subgroup, catalytic core
Genomic Order:  1486 Name:  ? Solyc11g040330.1
Secondary Identifier:  ? PAC:36152648
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g040330.1 0.5kb upstream 0.5kb upstream 8930 true SL2.50ch11: 37865413-37874342 Solanum lycopersicum
Solyc11g040330.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 37873843-37874342 Solanum lycopersicum
Solyc11g040330.1 0.5kb downstream 0.5kb downstream 8930 true SL2.50ch11: 37864913-37873842 Solanum lycopersicum
Solyc11g040330.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 37864913-37865412 Solanum lycopersicum
Solyc11g040330.1 1.0kb upstream 1.0kb upstream 9430 true SL2.50ch11: 37865413-37874842 Solanum lycopersicum
Solyc11g040330.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 37873843-37874842 Solanum lycopersicum
Solyc11g040330.1 1.0kb downstream 1.0kb downstream 9430 true SL2.50ch11: 37864413-37873842 Solanum lycopersicum
Solyc11g040330.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 37864413-37865412 Solanum lycopersicum
Solyc11g040330.1 2.0kb upstream 2.0kb upstream 10430 true SL2.50ch11: 37865413-37875842 Solanum lycopersicum
Solyc11g040330.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 37873843-37875842 Solanum lycopersicum
Solyc11g040330.1 2.0kb downstream 2.0kb downstream 10430 true SL2.50ch11: 37863413-37873842 Solanum lycopersicum
Solyc11g040330.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 37863413-37865412 Solanum lycopersicum
Solyc11g040330.1 5.0kb upstream 5.0kb upstream 13430 true SL2.50ch11: 37865413-37878842 Solanum lycopersicum
Solyc11g040330.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 37873843-37878842 Solanum lycopersicum
Solyc11g040330.1 5.0kb downstream 5.0kb downstream 13430 true SL2.50ch11: 37860413-37873842 Solanum lycopersicum
Solyc11g040330.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 37860413-37865412 Solanum lycopersicum
Solyc11g040330.1 10.0kb upstream 10.0kb upstream 18430 true SL2.50ch11: 37865413-37883842 Solanum lycopersicum
Solyc11g040330.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 37873843-37883842 Solanum lycopersicum
Solyc11g040330.1 10.0kb downstream 10.0kb downstream 18430 true SL2.50ch11: 37855413-37873842 Solanum lycopersicum
Solyc11g040330.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 37855413-37865412 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471070 5263 Asterids View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain