Gene : Solyc11g022610.1 S. lycopersicum ITAG2.4
Defline:  (1 of 8) PF00163 - Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) Description:  30S ribosomal protein S4 chloroplastic (AHRD V1 ***- B4XY03_9CARY); contains Interpro domain(s) IPR001912 Ribosomal protein S4
Genomic Order:  1049 Name:  ? Solyc11g022610.1
Secondary Identifier:  ? PAC:36153157
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g022610.1 0.5kb upstream 0.5kb upstream 1278 true SL2.50ch11: 14959982-14961259 Solanum lycopersicum
Solyc11g022610.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 14959982-14960481 Solanum lycopersicum
Solyc11g022610.1 0.5kb downstream 0.5kb downstream 1278 true SL2.50ch11: 14960482-14961759 Solanum lycopersicum
Solyc11g022610.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 14961260-14961759 Solanum lycopersicum
Solyc11g022610.1 1.0kb upstream 1.0kb upstream 1778 true SL2.50ch11: 14959482-14961259 Solanum lycopersicum
Solyc11g022610.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 14959482-14960481 Solanum lycopersicum
Solyc11g022610.1 1.0kb downstream 1.0kb downstream 1778 true SL2.50ch11: 14960482-14962259 Solanum lycopersicum
Solyc11g022610.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 14961260-14962259 Solanum lycopersicum
Solyc11g022610.1 2.0kb upstream 2.0kb upstream 2778 true SL2.50ch11: 14958482-14961259 Solanum lycopersicum
Solyc11g022610.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 14958482-14960481 Solanum lycopersicum
Solyc11g022610.1 2.0kb downstream 2.0kb downstream 2778 true SL2.50ch11: 14960482-14963259 Solanum lycopersicum
Solyc11g022610.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 14961260-14963259 Solanum lycopersicum
Solyc11g022610.1 5.0kb upstream 5.0kb upstream 5778 true SL2.50ch11: 14955482-14961259 Solanum lycopersicum
Solyc11g022610.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 14955482-14960481 Solanum lycopersicum
Solyc11g022610.1 5.0kb downstream 5.0kb downstream 5778 true SL2.50ch11: 14960482-14966259 Solanum lycopersicum
Solyc11g022610.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 14961260-14966259 Solanum lycopersicum
Solyc11g022610.1 10.0kb upstream 10.0kb upstream 10778 true SL2.50ch11: 14950482-14961259 Solanum lycopersicum
Solyc11g022610.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 14950482-14960481 Solanum lycopersicum
Solyc11g022610.1 10.0kb downstream 10.0kb downstream 10778 true SL2.50ch11: 14960482-14971259 Solanum lycopersicum
Solyc11g022610.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 14961260-14971259 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028910 5273 Angiosperm View MSA
121371541 5263 Asterids Singleton cluster - no MSA
123750002 5271 Pentapetalae View MSA
122790562 5272 Eudicot View MSA
121298338 5274 Embryophyte View MSA
123336315 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain