Gene : Solyc11g069480.1 S. lycopersicum ITAG2.4
Defline:  (1 of 45) PF04535 - Domain of unknown function (DUF588) (DUF588) Description:  UPF0497 membrane protein At2g28370 (AHRD V1 ***- U4977_ARATH); contains Interpro domain(s) IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
Genomic Order:  2101 Name:  ? Solyc11g069480.1
Secondary Identifier:  ? PAC:36152924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g069480.1 0.5kb upstream 0.5kb upstream 3724 true SL2.50ch11: 54073567-54077290 Solanum lycopersicum
Solyc11g069480.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 54076791-54077290 Solanum lycopersicum
Solyc11g069480.1 0.5kb downstream 0.5kb downstream 3724 true SL2.50ch11: 54073067-54076790 Solanum lycopersicum
Solyc11g069480.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 54073067-54073566 Solanum lycopersicum
Solyc11g069480.1 1.0kb upstream 1.0kb upstream 4224 true SL2.50ch11: 54073567-54077790 Solanum lycopersicum
Solyc11g069480.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 54076791-54077790 Solanum lycopersicum
Solyc11g069480.1 1.0kb downstream 1.0kb downstream 4224 true SL2.50ch11: 54072567-54076790 Solanum lycopersicum
Solyc11g069480.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 54072567-54073566 Solanum lycopersicum
Solyc11g069480.1 2.0kb upstream 2.0kb upstream 5224 true SL2.50ch11: 54073567-54078790 Solanum lycopersicum
Solyc11g069480.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 54076791-54078790 Solanum lycopersicum
Solyc11g069480.1 2.0kb downstream 2.0kb downstream 5224 true SL2.50ch11: 54071567-54076790 Solanum lycopersicum
Solyc11g069480.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 54071567-54073566 Solanum lycopersicum
Solyc11g069480.1 5.0kb upstream 5.0kb upstream 8224 true SL2.50ch11: 54073567-54081790 Solanum lycopersicum
Solyc11g069480.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 54076791-54081790 Solanum lycopersicum
Solyc11g069480.1 5.0kb downstream 5.0kb downstream 8224 true SL2.50ch11: 54068567-54076790 Solanum lycopersicum
Solyc11g069480.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 54068567-54073566 Solanum lycopersicum
Solyc11g069480.1 10.0kb upstream 10.0kb upstream 13224 true SL2.50ch11: 54073567-54086790 Solanum lycopersicum
Solyc11g069480.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 54076791-54086790 Solanum lycopersicum
Solyc11g069480.1 10.0kb downstream 10.0kb downstream 13224 true SL2.50ch11: 54063567-54076790 Solanum lycopersicum
Solyc11g069480.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 54063567-54073566 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027815 5273 Angiosperm View MSA
121474539 5263 Asterids View MSA
123747778 5271 Pentapetalae View MSA
122796874 5272 Eudicot View MSA
121349907 5274 Embryophyte View MSA
123381495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain