Gene : Solyc11g069880.1 S. lycopersicum ITAG2.4
Description:  Ripening-related protein 3 (AHRD V1 **-- RIP3_ORYSJ); contains Interpro domain(s) IPR009009 Barwin-related endoglucanase Genomic Order:  2141
Name:  ? Solyc11g069880.1 Secondary Identifier:  ? PAC:36153181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g069880.1 0.5kb upstream 0.5kb upstream 1139 true SL2.50ch11: 54491826-54492964 Solanum lycopersicum
Solyc11g069880.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 54491826-54492325 Solanum lycopersicum
Solyc11g069880.1 0.5kb downstream 0.5kb downstream 1139 true SL2.50ch11: 54492326-54493464 Solanum lycopersicum
Solyc11g069880.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 54492965-54493464 Solanum lycopersicum
Solyc11g069880.1 1.0kb upstream 1.0kb upstream 1639 true SL2.50ch11: 54491326-54492964 Solanum lycopersicum
Solyc11g069880.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 54491326-54492325 Solanum lycopersicum
Solyc11g069880.1 1.0kb downstream 1.0kb downstream 1639 true SL2.50ch11: 54492326-54493964 Solanum lycopersicum
Solyc11g069880.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 54492965-54493964 Solanum lycopersicum
Solyc11g069880.1 2.0kb upstream 2.0kb upstream 2639 true SL2.50ch11: 54490326-54492964 Solanum lycopersicum
Solyc11g069880.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 54490326-54492325 Solanum lycopersicum
Solyc11g069880.1 2.0kb downstream 2.0kb downstream 2639 true SL2.50ch11: 54492326-54494964 Solanum lycopersicum
Solyc11g069880.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 54492965-54494964 Solanum lycopersicum
Solyc11g069880.1 5.0kb upstream 5.0kb upstream 5639 true SL2.50ch11: 54487326-54492964 Solanum lycopersicum
Solyc11g069880.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 54487326-54492325 Solanum lycopersicum
Solyc11g069880.1 5.0kb downstream 5.0kb downstream 5639 true SL2.50ch11: 54492326-54497964 Solanum lycopersicum
Solyc11g069880.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 54492965-54497964 Solanum lycopersicum
Solyc11g069880.1 10.0kb upstream 10.0kb upstream 10639 true SL2.50ch11: 54482326-54492964 Solanum lycopersicum
Solyc11g069880.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 54482326-54492325 Solanum lycopersicum
Solyc11g069880.1 10.0kb downstream 10.0kb downstream 10639 true SL2.50ch11: 54492326-54502964 Solanum lycopersicum
Solyc11g069880.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 54492965-54502964 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414113 5263 Asterids View MSA
123742356 5271 Pentapetalae View MSA
122770271 5272 Eudicot View MSA
122049073 5273 Angiosperm View MSA
121348400 5274 Embryophyte View MSA
123380848 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain