Gene : Solyc11g068550.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31852:SF7 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Description:  Os12g0119800 protein (Fragment) (AHRD V1 ***- Q0IQI1_ORYSJ); contains Interpro domain(s) IPR010847 Harpin-induced 1
Genomic Order:  2008 Name:  ? Solyc11g068550.1
Secondary Identifier:  ? PAC:36152565
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g068550.1 0.5kb upstream 0.5kb upstream 1067 true SL2.50ch11: 53239797-53240863 Solanum lycopersicum
Solyc11g068550.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 53240364-53240863 Solanum lycopersicum
Solyc11g068550.1 0.5kb downstream 0.5kb downstream 1067 true SL2.50ch11: 53239297-53240363 Solanum lycopersicum
Solyc11g068550.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 53239297-53239796 Solanum lycopersicum
Solyc11g068550.1 1.0kb upstream 1.0kb upstream 1567 true SL2.50ch11: 53239797-53241363 Solanum lycopersicum
Solyc11g068550.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 53240364-53241363 Solanum lycopersicum
Solyc11g068550.1 1.0kb downstream 1.0kb downstream 1567 true SL2.50ch11: 53238797-53240363 Solanum lycopersicum
Solyc11g068550.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 53238797-53239796 Solanum lycopersicum
Solyc11g068550.1 2.0kb upstream 2.0kb upstream 2567 true SL2.50ch11: 53239797-53242363 Solanum lycopersicum
Solyc11g068550.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 53240364-53242363 Solanum lycopersicum
Solyc11g068550.1 2.0kb downstream 2.0kb downstream 2567 true SL2.50ch11: 53237797-53240363 Solanum lycopersicum
Solyc11g068550.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 53237797-53239796 Solanum lycopersicum
Solyc11g068550.1 5.0kb upstream 5.0kb upstream 5567 true SL2.50ch11: 53239797-53245363 Solanum lycopersicum
Solyc11g068550.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 53240364-53245363 Solanum lycopersicum
Solyc11g068550.1 5.0kb downstream 5.0kb downstream 5567 true SL2.50ch11: 53234797-53240363 Solanum lycopersicum
Solyc11g068550.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 53234797-53239796 Solanum lycopersicum
Solyc11g068550.1 10.0kb upstream 10.0kb upstream 10567 true SL2.50ch11: 53239797-53250363 Solanum lycopersicum
Solyc11g068550.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 53240364-53250363 Solanum lycopersicum
Solyc11g068550.1 10.0kb downstream 10.0kb downstream 10567 true SL2.50ch11: 53229797-53240363 Solanum lycopersicum
Solyc11g068550.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 53229797-53239796 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470194 5263 Asterids View MSA
123751037 5271 Pentapetalae View MSA
122791768 5272 Eudicot View MSA
122047414 5273 Angiosperm View MSA
121346777 5274 Embryophyte View MSA
123380442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain