Gene : Solyc11g072950.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31057:SF0 - E3 UFM1-PROTEIN LIGASE 1 Description:  E3 UFM1-protein ligase 1 homolog (AHRD V1 ***- UFL1_ARATH); contains Interpro domain(s) IPR018611 Protein of unknown function DUF2042
Genomic Order:  2349 Name:  ? Solyc11g072950.1
Secondary Identifier:  ? PAC:36153744
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g072950.1 0.5kb upstream 0.5kb upstream 7634 true SL2.50ch11: 56102661-56110294 Solanum lycopersicum
Solyc11g072950.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 56109795-56110294 Solanum lycopersicum
Solyc11g072950.1 0.5kb downstream 0.5kb downstream 7634 true SL2.50ch11: 56102161-56109794 Solanum lycopersicum
Solyc11g072950.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 56102161-56102660 Solanum lycopersicum
Solyc11g072950.1 1.0kb upstream 1.0kb upstream 8134 true SL2.50ch11: 56102661-56110794 Solanum lycopersicum
Solyc11g072950.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 56109795-56110794 Solanum lycopersicum
Solyc11g072950.1 1.0kb downstream 1.0kb downstream 8134 true SL2.50ch11: 56101661-56109794 Solanum lycopersicum
Solyc11g072950.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 56101661-56102660 Solanum lycopersicum
Solyc11g072950.1 2.0kb upstream 2.0kb upstream 9134 true SL2.50ch11: 56102661-56111794 Solanum lycopersicum
Solyc11g072950.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 56109795-56111794 Solanum lycopersicum
Solyc11g072950.1 2.0kb downstream 2.0kb downstream 9134 true SL2.50ch11: 56100661-56109794 Solanum lycopersicum
Solyc11g072950.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 56100661-56102660 Solanum lycopersicum
Solyc11g072950.1 5.0kb upstream 5.0kb upstream 12134 true SL2.50ch11: 56102661-56114794 Solanum lycopersicum
Solyc11g072950.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 56109795-56114794 Solanum lycopersicum
Solyc11g072950.1 5.0kb downstream 5.0kb downstream 12134 true SL2.50ch11: 56097661-56109794 Solanum lycopersicum
Solyc11g072950.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 56097661-56102660 Solanum lycopersicum
Solyc11g072950.1 10.0kb upstream 10.0kb upstream 17134 true SL2.50ch11: 56102661-56119794 Solanum lycopersicum
Solyc11g072950.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 56109795-56119794 Solanum lycopersicum
Solyc11g072950.1 10.0kb downstream 10.0kb downstream 17134 true SL2.50ch11: 56092661-56109794 Solanum lycopersicum
Solyc11g072950.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 56092661-56102660 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026361 5273 Angiosperm View MSA
121471856 5263 Asterids View MSA
123747410 5271 Pentapetalae View MSA
122787420 5272 Eudicot View MSA
121346113 5274 Embryophyte View MSA
123424330 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain