Gene : Solyc11g072520.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 4.2.1.51 - Prephenate dehydratase Description:  Prephenate dehydratase (AHRD V1 ***- B7X943_HEVBR); contains Interpro domain(s) IPR001086 Prephenate dehydratase
Genomic Order:  2306 Name:  ? Solyc11g072520.1
Secondary Identifier:  ? PAC:36152227
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-3462 Solanum lycopersicum pathologic  
Slycopersicum PWY-3481 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc11g072520.1 0.5kb upstream 0.5kb upstream 6522 true SL2.50ch11: 55708685-55715206 Solanum lycopersicum
Solyc11g072520.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch11: 55708685-55709184 Solanum lycopersicum
Solyc11g072520.1 0.5kb downstream 0.5kb downstream 6522 true SL2.50ch11: 55709185-55715706 Solanum lycopersicum
Solyc11g072520.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch11: 55715207-55715706 Solanum lycopersicum
Solyc11g072520.1 1.0kb upstream 1.0kb upstream 7022 true SL2.50ch11: 55708185-55715206 Solanum lycopersicum
Solyc11g072520.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch11: 55708185-55709184 Solanum lycopersicum
Solyc11g072520.1 1.0kb downstream 1.0kb downstream 7022 true SL2.50ch11: 55709185-55716206 Solanum lycopersicum
Solyc11g072520.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch11: 55715207-55716206 Solanum lycopersicum
Solyc11g072520.1 2.0kb upstream 2.0kb upstream 8022 true SL2.50ch11: 55707185-55715206 Solanum lycopersicum
Solyc11g072520.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch11: 55707185-55709184 Solanum lycopersicum
Solyc11g072520.1 2.0kb downstream 2.0kb downstream 8022 true SL2.50ch11: 55709185-55717206 Solanum lycopersicum
Solyc11g072520.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch11: 55715207-55717206 Solanum lycopersicum
Solyc11g072520.1 5.0kb upstream 5.0kb upstream 11022 true SL2.50ch11: 55704185-55715206 Solanum lycopersicum
Solyc11g072520.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch11: 55704185-55709184 Solanum lycopersicum
Solyc11g072520.1 5.0kb downstream 5.0kb downstream 11022 true SL2.50ch11: 55709185-55720206 Solanum lycopersicum
Solyc11g072520.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch11: 55715207-55720206 Solanum lycopersicum
Solyc11g072520.1 10.0kb upstream 10.0kb upstream 16022 true SL2.50ch11: 55699185-55715206 Solanum lycopersicum
Solyc11g072520.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch11: 55699185-55709184 Solanum lycopersicum
Solyc11g072520.1 10.0kb downstream 10.0kb downstream 16022 true SL2.50ch11: 55709185-55725206 Solanum lycopersicum
Solyc11g072520.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch11: 55715207-55725206 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040982 5273 Angiosperm View MSA
121469075 5263 Asterids View MSA
123737852 5271 Pentapetalae View MSA
122798804 5272 Eudicot View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain