Gene : Solyc00g107050.1 S. lycopersicum ITAG2.4
Defline:  (1 of 18) PTHR10252 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Description:  Nuclear transcription factor Y subunit C-1 (AHRD V1 *-*- B6SWV5_MAIZE); contains Interpro domain(s) IPR003958 Transcription factor CBF/NF-Y/archaeal histone
Genomic Order:  627 Name:  ? Solyc00g107050.1
Secondary Identifier:  ? PAC:36128186
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g107050.1 0.5kb upstream 0.5kb upstream 935 true SL2.50ch00: 15998053-15998987 Solanum lycopersicum
Solyc00g107050.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 15998488-15998987 Solanum lycopersicum
Solyc00g107050.1 0.5kb downstream 0.5kb downstream 935 true SL2.50ch00: 15997553-15998487 Solanum lycopersicum
Solyc00g107050.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 15997553-15998052 Solanum lycopersicum
Solyc00g107050.1 1.0kb upstream 1.0kb upstream 1435 true SL2.50ch00: 15998053-15999487 Solanum lycopersicum
Solyc00g107050.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 15998488-15999487 Solanum lycopersicum
Solyc00g107050.1 1.0kb downstream 1.0kb downstream 1435 true SL2.50ch00: 15997053-15998487 Solanum lycopersicum
Solyc00g107050.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 15997053-15998052 Solanum lycopersicum
Solyc00g107050.1 2.0kb upstream 2.0kb upstream 2435 true SL2.50ch00: 15998053-16000487 Solanum lycopersicum
Solyc00g107050.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 15998488-16000487 Solanum lycopersicum
Solyc00g107050.1 2.0kb downstream 2.0kb downstream 2435 true SL2.50ch00: 15996053-15998487 Solanum lycopersicum
Solyc00g107050.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 15996053-15998052 Solanum lycopersicum
Solyc00g107050.1 5.0kb upstream 5.0kb upstream 5435 true SL2.50ch00: 15998053-16003487 Solanum lycopersicum
Solyc00g107050.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 15998488-16003487 Solanum lycopersicum
Solyc00g107050.1 5.0kb downstream 5.0kb downstream 5435 true SL2.50ch00: 15993053-15998487 Solanum lycopersicum
Solyc00g107050.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 15993053-15998052 Solanum lycopersicum
Solyc00g107050.1 10.0kb upstream 10.0kb upstream 10435 true SL2.50ch00: 15998053-16008487 Solanum lycopersicum
Solyc00g107050.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 15998488-16008487 Solanum lycopersicum
Solyc00g107050.1 10.0kb downstream 10.0kb downstream 10435 true SL2.50ch00: 15988053-15998487 Solanum lycopersicum
Solyc00g107050.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 15988053-15998052 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482159 5263 Asterids View MSA
123752429 5271 Pentapetalae View MSA
122774553 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain