Gene : Solyc00g230070.1 S. lycopersicum ITAG2.4
Defline:  (1 of 11) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Description:  Photosystem II CP43 chlorophyll apoprotein (AHRD V1 ***- D1L8N4_BRANA); contains Interpro domain(s) IPR000932 Photosystem antenna protein-like
Genomic Order:  815 Name:  ? Solyc00g230070.1
Secondary Identifier:  ? PAC:36128103
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc00g230070.1 0.5kb upstream 0.5kb upstream 764 true SL2.50ch00: 19614385-19615148 Solanum lycopersicum
Solyc00g230070.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch00: 19614649-19615148 Solanum lycopersicum
Solyc00g230070.1 0.5kb downstream 0.5kb downstream 764 true SL2.50ch00: 19613885-19614648 Solanum lycopersicum
Solyc00g230070.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch00: 19613885-19614384 Solanum lycopersicum
Solyc00g230070.1 1.0kb upstream 1.0kb upstream 1264 true SL2.50ch00: 19614385-19615648 Solanum lycopersicum
Solyc00g230070.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch00: 19614649-19615648 Solanum lycopersicum
Solyc00g230070.1 1.0kb downstream 1.0kb downstream 1264 true SL2.50ch00: 19613385-19614648 Solanum lycopersicum
Solyc00g230070.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch00: 19613385-19614384 Solanum lycopersicum
Solyc00g230070.1 2.0kb upstream 2.0kb upstream 2264 true SL2.50ch00: 19614385-19616648 Solanum lycopersicum
Solyc00g230070.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch00: 19614649-19616648 Solanum lycopersicum
Solyc00g230070.1 2.0kb downstream 2.0kb downstream 2264 true SL2.50ch00: 19612385-19614648 Solanum lycopersicum
Solyc00g230070.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch00: 19612385-19614384 Solanum lycopersicum
Solyc00g230070.1 5.0kb upstream 5.0kb upstream 5264 true SL2.50ch00: 19614385-19619648 Solanum lycopersicum
Solyc00g230070.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch00: 19614649-19619648 Solanum lycopersicum
Solyc00g230070.1 5.0kb downstream 5.0kb downstream 5264 true SL2.50ch00: 19609385-19614648 Solanum lycopersicum
Solyc00g230070.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch00: 19609385-19614384 Solanum lycopersicum
Solyc00g230070.1 10.0kb upstream 10.0kb upstream 10264 true SL2.50ch00: 19614385-19624648 Solanum lycopersicum
Solyc00g230070.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch00: 19614649-19624648 Solanum lycopersicum
Solyc00g230070.1 10.0kb downstream 10.0kb downstream 10264 true SL2.50ch00: 19604385-19614648 Solanum lycopersicum
Solyc00g230070.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch00: 19604385-19614384 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481747 5263 Asterids View MSA
123752529 5271 Pentapetalae View MSA
122774617 5272 Eudicot View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain