Gene : AUR62019114 C. quinoa v1.0
Defline:  (1 of 1) PF06045//PF14683//PF14686 - Rhamnogalacturonate lyase family (Rhamnogal_lyase) // Polysaccharide lyase family 4, domain III (CBM-like) // Polysaccharide lyase family 4, domain II (fn3_3) Genomic Order:  219
Name:  ? AUR62019114 Secondary Identifier:  ? PAC:36282223
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62019114 0.5kb upstream 0.5kb upstream 7940 true C_Quinoa_Scaffold_3876: 3034643-3042582 Chenopodium quinoa
AUR62019114 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3876: 3042083-3042582 Chenopodium quinoa
AUR62019114 0.5kb downstream 0.5kb downstream 7940 true C_Quinoa_Scaffold_3876: 3034143-3042082 Chenopodium quinoa
AUR62019114 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3876: 3034143-3034642 Chenopodium quinoa
AUR62019114 1.0kb upstream 1.0kb upstream 8440 true C_Quinoa_Scaffold_3876: 3034643-3043082 Chenopodium quinoa
AUR62019114 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3876: 3042083-3043082 Chenopodium quinoa
AUR62019114 1.0kb downstream 1.0kb downstream 8440 true C_Quinoa_Scaffold_3876: 3033643-3042082 Chenopodium quinoa
AUR62019114 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3876: 3033643-3034642 Chenopodium quinoa
AUR62019114 2.0kb upstream 2.0kb upstream 9440 true C_Quinoa_Scaffold_3876: 3034643-3044082 Chenopodium quinoa
AUR62019114 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3876: 3042083-3044082 Chenopodium quinoa
AUR62019114 2.0kb downstream 2.0kb downstream 9440 true C_Quinoa_Scaffold_3876: 3032643-3042082 Chenopodium quinoa
AUR62019114 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3876: 3032643-3034642 Chenopodium quinoa
AUR62019114 5.0kb upstream 5.0kb upstream 12440 true C_Quinoa_Scaffold_3876: 3034643-3047082 Chenopodium quinoa
AUR62019114 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3876: 3042083-3047082 Chenopodium quinoa
AUR62019114 5.0kb downstream 5.0kb downstream 12440 true C_Quinoa_Scaffold_3876: 3029643-3042082 Chenopodium quinoa
AUR62019114 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3876: 3029643-3034642 Chenopodium quinoa
AUR62019114 10.0kb upstream 10.0kb upstream 17440 true C_Quinoa_Scaffold_3876: 3034643-3052082 Chenopodium quinoa
AUR62019114 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3876: 3042083-3052082 Chenopodium quinoa
AUR62019114 10.0kb downstream 10.0kb downstream 17440 true C_Quinoa_Scaffold_3876: 3024643-3042082 Chenopodium quinoa
AUR62019114 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3876: 3024643-3034642 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041153 5273 Angiosperm View MSA
123741436 5271 Pentapetalae View MSA
122791943 5272 Eudicot View MSA
121347296 5274 Embryophyte View MSA
123380523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain