Gene : AUR62029926 C. quinoa v1.0
Defline:  (1 of 2) PTHR23416//PTHR23416:SF2 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 5 Genomic Order:  100
Name:  ? AUR62029926 Secondary Identifier:  ? PAC:36324613
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa CYSTSYN-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-6936 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62029926 0.5kb upstream 0.5kb upstream 1935 true C_Quinoa_Scaffold_3500: 5224622-5226556 Chenopodium quinoa
AUR62029926 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3500: 5226057-5226556 Chenopodium quinoa
AUR62029926 0.5kb downstream 0.5kb downstream 1935 true C_Quinoa_Scaffold_3500: 5224122-5226056 Chenopodium quinoa
AUR62029926 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3500: 5224122-5224621 Chenopodium quinoa
AUR62029926 1.0kb upstream 1.0kb upstream 2435 true C_Quinoa_Scaffold_3500: 5224622-5227056 Chenopodium quinoa
AUR62029926 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3500: 5226057-5227056 Chenopodium quinoa
AUR62029926 1.0kb downstream 1.0kb downstream 2435 true C_Quinoa_Scaffold_3500: 5223622-5226056 Chenopodium quinoa
AUR62029926 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3500: 5223622-5224621 Chenopodium quinoa
AUR62029926 2.0kb upstream 2.0kb upstream 3435 true C_Quinoa_Scaffold_3500: 5224622-5228056 Chenopodium quinoa
AUR62029926 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3500: 5226057-5228056 Chenopodium quinoa
AUR62029926 2.0kb downstream 2.0kb downstream 3435 true C_Quinoa_Scaffold_3500: 5222622-5226056 Chenopodium quinoa
AUR62029926 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3500: 5222622-5224621 Chenopodium quinoa
AUR62029926 5.0kb upstream 5.0kb upstream 6435 true C_Quinoa_Scaffold_3500: 5224622-5231056 Chenopodium quinoa
AUR62029926 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3500: 5226057-5231056 Chenopodium quinoa
AUR62029926 5.0kb downstream 5.0kb downstream 6435 true C_Quinoa_Scaffold_3500: 5219622-5226056 Chenopodium quinoa
AUR62029926 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3500: 5219622-5224621 Chenopodium quinoa
AUR62029926 10.0kb upstream 10.0kb upstream 11435 true C_Quinoa_Scaffold_3500: 5224622-5236056 Chenopodium quinoa
AUR62029926 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3500: 5226057-5236056 Chenopodium quinoa
AUR62029926 10.0kb downstream 10.0kb downstream 11435 true C_Quinoa_Scaffold_3500: 5214622-5226056 Chenopodium quinoa
AUR62029926 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3500: 5214622-5224621 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123738273 5271 Pentapetalae View MSA
122789751 5272 Eudicot View MSA
122047158 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain