Gene : AUR62040193 C. quinoa v1.0
Defline:  (1 of 4) K15322 - tRNA-splicing endonuclease subunit Sen2 (TSEN2) Genomic Order:  41
Name:  ? AUR62040193 Secondary Identifier:  ? PAC:36296293
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-6689 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62040193 0.5kb upstream 0.5kb upstream 1244 true C_Quinoa_Scaffold_3626: 1037757-1039000 Chenopodium quinoa
AUR62040193 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3626: 1038501-1039000 Chenopodium quinoa
AUR62040193 0.5kb downstream 0.5kb downstream 1244 true C_Quinoa_Scaffold_3626: 1037257-1038500 Chenopodium quinoa
AUR62040193 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3626: 1037257-1037756 Chenopodium quinoa
AUR62040193 1.0kb upstream 1.0kb upstream 1744 true C_Quinoa_Scaffold_3626: 1037757-1039500 Chenopodium quinoa
AUR62040193 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3626: 1038501-1039500 Chenopodium quinoa
AUR62040193 1.0kb downstream 1.0kb downstream 1744 true C_Quinoa_Scaffold_3626: 1036757-1038500 Chenopodium quinoa
AUR62040193 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3626: 1036757-1037756 Chenopodium quinoa
AUR62040193 2.0kb upstream 2.0kb upstream 2744 true C_Quinoa_Scaffold_3626: 1037757-1040500 Chenopodium quinoa
AUR62040193 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3626: 1038501-1040500 Chenopodium quinoa
AUR62040193 2.0kb downstream 2.0kb downstream 2744 true C_Quinoa_Scaffold_3626: 1035757-1038500 Chenopodium quinoa
AUR62040193 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3626: 1035757-1037756 Chenopodium quinoa
AUR62040193 5.0kb upstream 5.0kb upstream 5744 true C_Quinoa_Scaffold_3626: 1037757-1043500 Chenopodium quinoa
AUR62040193 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3626: 1038501-1043500 Chenopodium quinoa
AUR62040193 5.0kb downstream 5.0kb downstream 5744 true C_Quinoa_Scaffold_3626: 1032757-1038500 Chenopodium quinoa
AUR62040193 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3626: 1032757-1037756 Chenopodium quinoa
AUR62040193 10.0kb upstream 10.0kb upstream 10744 true C_Quinoa_Scaffold_3626: 1037757-1048500 Chenopodium quinoa
AUR62040193 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3626: 1038501-1048500 Chenopodium quinoa
AUR62040193 10.0kb downstream 10.0kb downstream 10744 true C_Quinoa_Scaffold_3626: 1027757-1038500 Chenopodium quinoa
AUR62040193 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3626: 1027757-1037756 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041240 5273 Angiosperm View MSA
123739625 5271 Pentapetalae View MSA
122788641 5272 Eudicot View MSA
123429143 5275 Viridiplantae View MSA
121344093 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain