Gene : AUR62043125 C. quinoa v1.0

Defline:  (1 of 2) K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A) Genomic Order:  1
Name:  ? AUR62043125 Secondary Identifier:  ? PAC:36297414

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62043125 0.5kb upstream 0.5kb upstream 32074 true C_Quinoa_Scaffold_3653: 137894-169967 Chenopodium quinoa
AUR62043125 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3653: 137894-138393 Chenopodium quinoa
AUR62043125 0.5kb downstream 0.5kb downstream 32074 true C_Quinoa_Scaffold_3653: 138394-170467 Chenopodium quinoa
AUR62043125 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3653: 169968-170467 Chenopodium quinoa
AUR62043125 1.0kb upstream 1.0kb upstream 32574 true C_Quinoa_Scaffold_3653: 137394-169967 Chenopodium quinoa
AUR62043125 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3653: 137394-138393 Chenopodium quinoa
AUR62043125 1.0kb downstream 1.0kb downstream 32574 true C_Quinoa_Scaffold_3653: 138394-170967 Chenopodium quinoa
AUR62043125 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3653: 169968-170967 Chenopodium quinoa
AUR62043125 2.0kb upstream 2.0kb upstream 33574 true C_Quinoa_Scaffold_3653: 136394-169967 Chenopodium quinoa
AUR62043125 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3653: 136394-138393 Chenopodium quinoa
AUR62043125 2.0kb downstream 2.0kb downstream 33574 true C_Quinoa_Scaffold_3653: 138394-171967 Chenopodium quinoa
AUR62043125 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3653: 169968-171967 Chenopodium quinoa
AUR62043125 5.0kb upstream 5.0kb upstream 36574 true C_Quinoa_Scaffold_3653: 133394-169967 Chenopodium quinoa
AUR62043125 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3653: 133394-138393 Chenopodium quinoa
AUR62043125 5.0kb downstream 5.0kb downstream 36574 true C_Quinoa_Scaffold_3653: 138394-174967 Chenopodium quinoa
AUR62043125 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3653: 169968-174967 Chenopodium quinoa
AUR62043125 10.0kb upstream 10.0kb upstream 41574 true C_Quinoa_Scaffold_3653: 128394-169967 Chenopodium quinoa
AUR62043125 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3653: 128394-138393 Chenopodium quinoa
AUR62043125 10.0kb downstream 10.0kb downstream 41574 true C_Quinoa_Scaffold_3653: 138394-179967 Chenopodium quinoa
AUR62043125 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3653: 169968-179967 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123740783 5271 Pentapetalae View MSA
122786544 5272 Eudicot View MSA
122045680 5273 Angiosperm View MSA
121344248 5274 Embryophyte View MSA
123424891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain