Gene : AUR62042837 C. quinoa v1.0

Defline:  (1 of 44) PF03078 - ATHILA ORF-1 family (ATHILA) Genomic Order:  6
Name:  ? AUR62042837 Secondary Identifier:  ? PAC:36283642

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62042837 0.5kb upstream 0.5kb upstream 2313 true C_Quinoa_Scaffold_3809: 656015-658327 Chenopodium quinoa
AUR62042837 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3809: 656015-656514 Chenopodium quinoa
AUR62042837 0.5kb downstream 0.5kb downstream 2313 true C_Quinoa_Scaffold_3809: 656515-658827 Chenopodium quinoa
AUR62042837 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3809: 658328-658827 Chenopodium quinoa
AUR62042837 1.0kb upstream 1.0kb upstream 2813 true C_Quinoa_Scaffold_3809: 655515-658327 Chenopodium quinoa
AUR62042837 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3809: 655515-656514 Chenopodium quinoa
AUR62042837 1.0kb downstream 1.0kb downstream 2813 true C_Quinoa_Scaffold_3809: 656515-659327 Chenopodium quinoa
AUR62042837 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3809: 658328-659327 Chenopodium quinoa
AUR62042837 2.0kb upstream 2.0kb upstream 3813 true C_Quinoa_Scaffold_3809: 654515-658327 Chenopodium quinoa
AUR62042837 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3809: 654515-656514 Chenopodium quinoa
AUR62042837 2.0kb downstream 2.0kb downstream 3813 true C_Quinoa_Scaffold_3809: 656515-660327 Chenopodium quinoa
AUR62042837 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3809: 658328-660327 Chenopodium quinoa
AUR62042837 5.0kb upstream 5.0kb upstream 6813 true C_Quinoa_Scaffold_3809: 651515-658327 Chenopodium quinoa
AUR62042837 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3809: 651515-656514 Chenopodium quinoa
AUR62042837 5.0kb downstream 5.0kb downstream 6813 true C_Quinoa_Scaffold_3809: 656515-663327 Chenopodium quinoa
AUR62042837 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3809: 658328-663327 Chenopodium quinoa
AUR62042837 10.0kb upstream 10.0kb upstream 11813 true C_Quinoa_Scaffold_3809: 646515-658327 Chenopodium quinoa
AUR62042837 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3809: 646515-656514 Chenopodium quinoa
AUR62042837 10.0kb downstream 10.0kb downstream 11813 true C_Quinoa_Scaffold_3809: 656515-668327 Chenopodium quinoa
AUR62042837 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3809: 658328-668327 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121778789 5273 Angiosperm View MSA
123735914 5271 Pentapetalae View MSA
122769443 5272 Eudicot View MSA
121050473 5274 Embryophyte View MSA
123090591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain