Gene : AUR62020563 C. quinoa v1.0
Defline:  (1 of 2) KOG0978//KOG1003//KOG4593 - E3 ubiquitin ligase involved in syntaxin degradation // Actin filament-coating protein tropomyosin // Mitotic checkpoint protein MAD1 Genomic Order:  5
Name:  ? AUR62020563 Secondary Identifier:  ? PAC:36282999
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62020563 0.5kb upstream 0.5kb upstream 5349 true C_Quinoa_Scaffold_3966: 51958-57306 Chenopodium quinoa
AUR62020563 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3966: 56807-57306 Chenopodium quinoa
AUR62020563 0.5kb downstream 0.5kb downstream 5349 true C_Quinoa_Scaffold_3966: 51458-56806 Chenopodium quinoa
AUR62020563 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3966: 51458-51957 Chenopodium quinoa
AUR62020563 1.0kb upstream 1.0kb upstream 5849 true C_Quinoa_Scaffold_3966: 51958-57806 Chenopodium quinoa
AUR62020563 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3966: 56807-57806 Chenopodium quinoa
AUR62020563 1.0kb downstream 1.0kb downstream 5849 true C_Quinoa_Scaffold_3966: 50958-56806 Chenopodium quinoa
AUR62020563 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3966: 50958-51957 Chenopodium quinoa
AUR62020563 2.0kb upstream 2.0kb upstream 6849 true C_Quinoa_Scaffold_3966: 51958-58806 Chenopodium quinoa
AUR62020563 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3966: 56807-58806 Chenopodium quinoa
AUR62020563 2.0kb downstream 2.0kb downstream 6849 true C_Quinoa_Scaffold_3966: 49958-56806 Chenopodium quinoa
AUR62020563 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3966: 49958-51957 Chenopodium quinoa
AUR62020563 5.0kb upstream 5.0kb upstream 9849 true C_Quinoa_Scaffold_3966: 51958-61806 Chenopodium quinoa
AUR62020563 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3966: 56807-61806 Chenopodium quinoa
AUR62020563 5.0kb downstream 5.0kb downstream 9849 true C_Quinoa_Scaffold_3966: 46958-56806 Chenopodium quinoa
AUR62020563 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3966: 46958-51957 Chenopodium quinoa
AUR62020563 10.0kb upstream 10.0kb upstream 14849 true C_Quinoa_Scaffold_3966: 51958-66806 Chenopodium quinoa
AUR62020563 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3966: 56807-66806 Chenopodium quinoa
AUR62020563 10.0kb downstream 10.0kb downstream 14849 true C_Quinoa_Scaffold_3966: 41958-56806 Chenopodium quinoa
AUR62020563 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3966: 41958-51957 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123748298 5271 Pentapetalae View MSA
122786637 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain