Gene : AUR62033656 C. quinoa v1.0
Defline:  (1 of 1) PF00133//PF01406//PF08264 - tRNA synthetases class I (I, L, M and V) (tRNA-synt_1) // tRNA synthetases class I (C) catalytic domain (tRNA-synt_1e) // Anticodon-binding domain of tRNA (Anticodon_1) Genomic Order:  53
Name:  ? AUR62033656 Secondary Identifier:  ? PAC:36287679
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa TRNA-CHARGING-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62033656 0.5kb upstream 0.5kb upstream 3755 true C_Quinoa_Scaffold_4209: 3162827-3166581 Chenopodium quinoa
AUR62033656 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4209: 3162827-3163326 Chenopodium quinoa
AUR62033656 0.5kb downstream 0.5kb downstream 3755 true C_Quinoa_Scaffold_4209: 3163327-3167081 Chenopodium quinoa
AUR62033656 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4209: 3166582-3167081 Chenopodium quinoa
AUR62033656 1.0kb upstream 1.0kb upstream 4255 true C_Quinoa_Scaffold_4209: 3162327-3166581 Chenopodium quinoa
AUR62033656 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4209: 3162327-3163326 Chenopodium quinoa
AUR62033656 1.0kb downstream 1.0kb downstream 4255 true C_Quinoa_Scaffold_4209: 3163327-3167581 Chenopodium quinoa
AUR62033656 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4209: 3166582-3167581 Chenopodium quinoa
AUR62033656 2.0kb upstream 2.0kb upstream 5255 true C_Quinoa_Scaffold_4209: 3161327-3166581 Chenopodium quinoa
AUR62033656 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4209: 3161327-3163326 Chenopodium quinoa
AUR62033656 2.0kb downstream 2.0kb downstream 5255 true C_Quinoa_Scaffold_4209: 3163327-3168581 Chenopodium quinoa
AUR62033656 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4209: 3166582-3168581 Chenopodium quinoa
AUR62033656 5.0kb upstream 5.0kb upstream 8255 true C_Quinoa_Scaffold_4209: 3158327-3166581 Chenopodium quinoa
AUR62033656 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4209: 3158327-3163326 Chenopodium quinoa
AUR62033656 5.0kb downstream 5.0kb downstream 8255 true C_Quinoa_Scaffold_4209: 3163327-3171581 Chenopodium quinoa
AUR62033656 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4209: 3166582-3171581 Chenopodium quinoa
AUR62033656 10.0kb upstream 10.0kb upstream 13255 true C_Quinoa_Scaffold_4209: 3153327-3166581 Chenopodium quinoa
AUR62033656 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4209: 3153327-3163326 Chenopodium quinoa
AUR62033656 10.0kb downstream 10.0kb downstream 13255 true C_Quinoa_Scaffold_4209: 3163327-3176581 Chenopodium quinoa
AUR62033656 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4209: 3166582-3176581 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain