Gene : AUR62037661 C. quinoa v1.0
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  43
Name:  ? AUR62037661 Secondary Identifier:  ? PAC:36311092
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa ARO-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-6163 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62037661 0.5kb upstream 0.5kb upstream 9554 true C_Quinoa_Scaffold_1477: 3169406-3178959 Chenopodium quinoa
AUR62037661 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1477: 3169406-3169905 Chenopodium quinoa
AUR62037661 0.5kb downstream 0.5kb downstream 9554 true C_Quinoa_Scaffold_1477: 3169906-3179459 Chenopodium quinoa
AUR62037661 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1477: 3178960-3179459 Chenopodium quinoa
AUR62037661 1.0kb upstream 1.0kb upstream 10054 true C_Quinoa_Scaffold_1477: 3168906-3178959 Chenopodium quinoa
AUR62037661 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1477: 3168906-3169905 Chenopodium quinoa
AUR62037661 1.0kb downstream 1.0kb downstream 10054 true C_Quinoa_Scaffold_1477: 3169906-3179959 Chenopodium quinoa
AUR62037661 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1477: 3178960-3179959 Chenopodium quinoa
AUR62037661 2.0kb upstream 2.0kb upstream 11054 true C_Quinoa_Scaffold_1477: 3167906-3178959 Chenopodium quinoa
AUR62037661 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1477: 3167906-3169905 Chenopodium quinoa
AUR62037661 2.0kb downstream 2.0kb downstream 11054 true C_Quinoa_Scaffold_1477: 3169906-3180959 Chenopodium quinoa
AUR62037661 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1477: 3178960-3180959 Chenopodium quinoa
AUR62037661 5.0kb upstream 5.0kb upstream 14054 true C_Quinoa_Scaffold_1477: 3164906-3178959 Chenopodium quinoa
AUR62037661 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1477: 3164906-3169905 Chenopodium quinoa
AUR62037661 5.0kb downstream 5.0kb downstream 14054 true C_Quinoa_Scaffold_1477: 3169906-3183959 Chenopodium quinoa
AUR62037661 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1477: 3178960-3183959 Chenopodium quinoa
AUR62037661 10.0kb upstream 10.0kb upstream 19054 true C_Quinoa_Scaffold_1477: 3159906-3178959 Chenopodium quinoa
AUR62037661 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1477: 3159906-3169905 Chenopodium quinoa
AUR62037661 10.0kb downstream 10.0kb downstream 19054 true C_Quinoa_Scaffold_1477: 3169906-3188959 Chenopodium quinoa
AUR62037661 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1477: 3178960-3188959 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
123747909 5271 Pentapetalae View MSA
122787011 5272 Eudicot View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain