Gene : AUR62036579 C. quinoa v1.0
Defline:  CHUP1: Protein CHUP1, chloroplastic Genomic Order:  45
Name:  ? AUR62036579 Secondary Identifier:  ? PAC:36304979
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62036579 0.5kb upstream 0.5kb upstream 5021 true C_Quinoa_Scaffold_4266: 1146152-1151172 Chenopodium quinoa
AUR62036579 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4266: 1146152-1146651 Chenopodium quinoa
AUR62036579 0.5kb downstream 0.5kb downstream 5021 true C_Quinoa_Scaffold_4266: 1146652-1151672 Chenopodium quinoa
AUR62036579 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4266: 1151173-1151672 Chenopodium quinoa
AUR62036579 1.0kb upstream 1.0kb upstream 5521 true C_Quinoa_Scaffold_4266: 1145652-1151172 Chenopodium quinoa
AUR62036579 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4266: 1145652-1146651 Chenopodium quinoa
AUR62036579 1.0kb downstream 1.0kb downstream 5521 true C_Quinoa_Scaffold_4266: 1146652-1152172 Chenopodium quinoa
AUR62036579 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4266: 1151173-1152172 Chenopodium quinoa
AUR62036579 2.0kb upstream 2.0kb upstream 6521 true C_Quinoa_Scaffold_4266: 1144652-1151172 Chenopodium quinoa
AUR62036579 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4266: 1144652-1146651 Chenopodium quinoa
AUR62036579 2.0kb downstream 2.0kb downstream 6521 true C_Quinoa_Scaffold_4266: 1146652-1153172 Chenopodium quinoa
AUR62036579 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4266: 1151173-1153172 Chenopodium quinoa
AUR62036579 5.0kb upstream 5.0kb upstream 9521 true C_Quinoa_Scaffold_4266: 1141652-1151172 Chenopodium quinoa
AUR62036579 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4266: 1141652-1146651 Chenopodium quinoa
AUR62036579 5.0kb downstream 5.0kb downstream 9521 true C_Quinoa_Scaffold_4266: 1146652-1156172 Chenopodium quinoa
AUR62036579 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4266: 1151173-1156172 Chenopodium quinoa
AUR62036579 10.0kb upstream 10.0kb upstream 14521 true C_Quinoa_Scaffold_4266: 1136652-1151172 Chenopodium quinoa
AUR62036579 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4266: 1136652-1146651 Chenopodium quinoa
AUR62036579 10.0kb downstream 10.0kb downstream 14521 true C_Quinoa_Scaffold_4266: 1146652-1161172 Chenopodium quinoa
AUR62036579 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4266: 1151173-1161172 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040940 5273 Angiosperm View MSA
123746963 5271 Pentapetalae View MSA
122786098 5272 Eudicot View MSA
121309774 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain