Gene : AUR62038224 C. quinoa v1.0
Defline:  (1 of 1) PF00153//PF01715//PF03175 - Mitochondrial carrier protein (Mito_carr) // IPP transferase (IPPT) // DNA polymerase type B, organellar and viral (DNA_pol_B_2) Genomic Order:  64
Name:  ? AUR62038224 Secondary Identifier:  ? PAC:36320865
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-2681 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62038224 0.5kb upstream 0.5kb upstream 1838 true C_Quinoa_Scaffold_4336: 3043868-3045705 Chenopodium quinoa
AUR62038224 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4336: 3045206-3045705 Chenopodium quinoa
AUR62038224 0.5kb downstream 0.5kb downstream 1838 true C_Quinoa_Scaffold_4336: 3043368-3045205 Chenopodium quinoa
AUR62038224 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4336: 3043368-3043867 Chenopodium quinoa
AUR62038224 1.0kb upstream 1.0kb upstream 2338 true C_Quinoa_Scaffold_4336: 3043868-3046205 Chenopodium quinoa
AUR62038224 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4336: 3045206-3046205 Chenopodium quinoa
AUR62038224 1.0kb downstream 1.0kb downstream 2338 true C_Quinoa_Scaffold_4336: 3042868-3045205 Chenopodium quinoa
AUR62038224 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4336: 3042868-3043867 Chenopodium quinoa
AUR62038224 2.0kb upstream 2.0kb upstream 3338 true C_Quinoa_Scaffold_4336: 3043868-3047205 Chenopodium quinoa
AUR62038224 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4336: 3045206-3047205 Chenopodium quinoa
AUR62038224 2.0kb downstream 2.0kb downstream 3338 true C_Quinoa_Scaffold_4336: 3041868-3045205 Chenopodium quinoa
AUR62038224 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4336: 3041868-3043867 Chenopodium quinoa
AUR62038224 5.0kb upstream 5.0kb upstream 6338 true C_Quinoa_Scaffold_4336: 3043868-3050205 Chenopodium quinoa
AUR62038224 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4336: 3045206-3050205 Chenopodium quinoa
AUR62038224 5.0kb downstream 5.0kb downstream 6338 true C_Quinoa_Scaffold_4336: 3038868-3045205 Chenopodium quinoa
AUR62038224 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4336: 3038868-3043867 Chenopodium quinoa
AUR62038224 10.0kb upstream 10.0kb upstream 11338 true C_Quinoa_Scaffold_4336: 3043868-3055205 Chenopodium quinoa
AUR62038224 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4336: 3045206-3055205 Chenopodium quinoa
AUR62038224 10.0kb downstream 10.0kb downstream 11338 true C_Quinoa_Scaffold_4336: 3033868-3045205 Chenopodium quinoa
AUR62038224 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4336: 3033868-3043867 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain