Gene : AUR62022279 C. quinoa v1.0
Defline:  (1 of 1) PF03080//PF03732//PF07727//PF14365 - Domain of unknown function (DUF239) (DUF239) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  240
Name:  ? AUR62022279 Secondary Identifier:  ? PAC:36287292
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62022279 0.5kb upstream 0.5kb upstream 27190 true C_Quinoa_Scaffold_4319: 4165234-4192423 Chenopodium quinoa
AUR62022279 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4319: 4191924-4192423 Chenopodium quinoa
AUR62022279 0.5kb downstream 0.5kb downstream 27190 true C_Quinoa_Scaffold_4319: 4164734-4191923 Chenopodium quinoa
AUR62022279 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4319: 4164734-4165233 Chenopodium quinoa
AUR62022279 1.0kb upstream 1.0kb upstream 27690 true C_Quinoa_Scaffold_4319: 4165234-4192923 Chenopodium quinoa
AUR62022279 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4319: 4191924-4192923 Chenopodium quinoa
AUR62022279 1.0kb downstream 1.0kb downstream 27690 true C_Quinoa_Scaffold_4319: 4164234-4191923 Chenopodium quinoa
AUR62022279 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4319: 4164234-4165233 Chenopodium quinoa
AUR62022279 2.0kb upstream 2.0kb upstream 28690 true C_Quinoa_Scaffold_4319: 4165234-4193923 Chenopodium quinoa
AUR62022279 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4319: 4191924-4193923 Chenopodium quinoa
AUR62022279 2.0kb downstream 2.0kb downstream 28690 true C_Quinoa_Scaffold_4319: 4163234-4191923 Chenopodium quinoa
AUR62022279 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4319: 4163234-4165233 Chenopodium quinoa
AUR62022279 5.0kb upstream 5.0kb upstream 31690 true C_Quinoa_Scaffold_4319: 4165234-4196923 Chenopodium quinoa
AUR62022279 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4319: 4191924-4196923 Chenopodium quinoa
AUR62022279 5.0kb downstream 5.0kb downstream 31690 true C_Quinoa_Scaffold_4319: 4160234-4191923 Chenopodium quinoa
AUR62022279 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4319: 4160234-4165233 Chenopodium quinoa
AUR62022279 10.0kb upstream 10.0kb upstream 36690 true C_Quinoa_Scaffold_4319: 4165234-4201923 Chenopodium quinoa
AUR62022279 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4319: 4191924-4201923 Chenopodium quinoa
AUR62022279 10.0kb downstream 10.0kb downstream 36690 true C_Quinoa_Scaffold_4319: 4155234-4191923 Chenopodium quinoa
AUR62022279 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4319: 4155234-4165233 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782283 5273 Angiosperm View MSA
123752407 5271 Pentapetalae View MSA
122774538 5272 Eudicot View MSA
121053815 5274 Embryophyte View MSA
123093823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain