Cucsa.383120
|
(1 of 1) PF00665//PF03732//PF07727//PF13976 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
C. sativus v1.0
|
|
4346
|
scaffold03882: 57494-61839 |
Thecc1EG009535
|
(1 of 1) PF00665//PF03732//PF07722//PF07727 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Peptidase C26 (Peptidase_C26) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) |
T. cacao v1.1
|
|
9938
|
scaffold_2: 25025186-25035123 |
Thecc1EG020141
|
(1 of 1) PF00665//PF03732//PF07727//PF13976 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
T. cacao v1.1
|
|
8108
|
scaffold_4: 26897994-26906101 |
Thecc1EG028765
|
(1 of 154) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED |
T. cacao v1.1
|
|
8915
|
scaffold_6: 17978232-17987146 |
AUR62009140
|
(1 of 2) PF00153//PF00665//PF07727 - Mitochondrial carrier protein (Mito_carr) // Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) |
C. quinoa v1.0
|
|
4025
|
C_Quinoa_Scaffold_3674: 1406799-1410823 |
AUR62030418
|
(1 of 3) PF00153//PF00665//PF14244 - Mitochondrial carrier protein (Mito_carr) // Integrase core domain (rve) // gag-polypeptide of LTR copia-type (UBN2_3) |
C. quinoa v1.0
|
|
6243
|
C_Quinoa_Scaffold_3973: 793292-799534 |
AUR62022279
|
(1 of 1) PF03080//PF03732//PF07727//PF14365 - Domain of unknown function (DUF239) (DUF239) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Domain of unknown function (DUF4409) (DUF4409) |
C. quinoa v1.0
|
|
26690
|
C_Quinoa_Scaffold_4319: 4165234-4191923 |
AUR62015586
|
(1 of 80) PF00153//PF14244 - Mitochondrial carrier protein (Mito_carr) // gag-polypeptide of LTR copia-type (UBN2_3) |
C. quinoa v1.0
|
|
8984
|
C_Quinoa_Scaffold_1529: 164027-173010 |
MD10G1196700
|
(1 of 1) PF00665//PF03732//PF07727 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) |
M. domestica v1.1
|
|
4183
|
Chr10: 29461628-29465810 |
MD12G1154200
|
(1 of 1) PF00854//PF03732//PF07727//PF13976 - POT family (PTR2) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
M. domestica v1.1
|
|
10669
|
Chr12: 23470922-23481590 |
MD05G1298000
|
(1 of 2) PF00665//PF03732//PF07727//PF13976 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
M. domestica v1.1
|
|
4359
|
Chr05: 43157747-43162105 |
HanXRQChr01g0018741
|
(1 of 6) PF00665//PF03732//PF07727//PF13976 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
H. annuus r1.2
|
|
4380
|
HanXRQChr01: 110820942-110825321 |
HanXRQChr02g0034791
|
(1 of 6) PF00665//PF03732//PF07727//PF13976 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
H. annuus r1.2
|
|
4947
|
HanXRQChr02: 18934238-18939184 |
HanXRQChr16g0517571
|
(1 of 6) PF00665//PF03732//PF07727//PF13976 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
H. annuus r1.2
|
|
5311
|
HanXRQChr16: 117354476-117359786 |
gene20290-v1.0-hybrid
|
(1 of 1) PF00665//PF03732//PF07727//PF13976 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
F. vesca v2.0.a2
|
|
4584
|
Fvb2: 18205916-18210499 |
gene37381-v2.0.a2-hybrid
|
(1 of 1) PF00665//PF03732//PF07727 - Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) |
F. vesca v2.0.a2
|
|
4909
|
Fvb5: 23524254-23529162 |