Gene : MD12G1154200 M. domestica v1.1
Defline:  (1 of 1) PF00854//PF03732//PF07727//PF13976 - POT family (PTR2) // Retrotransposon gag protein (Retrotrans_gag) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) Genomic Order:  1295
Name:  ? MD12G1154200 Secondary Identifier:  ? PAC:40120830
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD12G1154200 0.5kb upstream 0.5kb upstream 11169 true Chr12: 23470922-23482090 Malus domestica
MD12G1154200 0.5kb upstream 0.5kb upstream 500 false Chr12: 23481591-23482090 Malus domestica
MD12G1154200 0.5kb downstream 0.5kb downstream 11169 true Chr12: 23470422-23481590 Malus domestica
MD12G1154200 0.5kb downstream 0.5kb downstream 500 false Chr12: 23470422-23470921 Malus domestica
MD12G1154200 1.0kb upstream 1.0kb upstream 11669 true Chr12: 23470922-23482590 Malus domestica
MD12G1154200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 23481591-23482590 Malus domestica
MD12G1154200 1.0kb downstream 1.0kb downstream 11669 true Chr12: 23469922-23481590 Malus domestica
MD12G1154200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 23469922-23470921 Malus domestica
MD12G1154200 2.0kb upstream 2.0kb upstream 12669 true Chr12: 23470922-23483590 Malus domestica
MD12G1154200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 23481591-23483590 Malus domestica
MD12G1154200 2.0kb downstream 2.0kb downstream 12669 true Chr12: 23468922-23481590 Malus domestica
MD12G1154200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 23468922-23470921 Malus domestica
MD12G1154200 5.0kb upstream 5.0kb upstream 15669 true Chr12: 23470922-23486590 Malus domestica
MD12G1154200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 23481591-23486590 Malus domestica
MD12G1154200 5.0kb downstream 5.0kb downstream 15669 true Chr12: 23465922-23481590 Malus domestica
MD12G1154200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 23465922-23470921 Malus domestica
MD12G1154200 10.0kb upstream 10.0kb upstream 20669 true Chr12: 23470922-23491590 Malus domestica
MD12G1154200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 23481591-23491590 Malus domestica
MD12G1154200 10.0kb downstream 10.0kb downstream 20669 true Chr12: 23460922-23481590 Malus domestica
MD12G1154200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 23460922-23470921 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782283 5273 Angiosperm View MSA
122237236 5265 Fabidae View MSA
124038233 5270 Rosid View MSA
123752407 5271 Pentapetalae View MSA
122774538 5272 Eudicot View MSA
121053815 5274 Embryophyte View MSA
123093823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain