Gene : AUR62027468 C. quinoa v1.0
Defline:  (1 of 11) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  129
Name:  ? AUR62027468 Secondary Identifier:  ? PAC:36323593
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa PWY-1121 Chenopodium quinoa pathologic  
Cquinoa PWY-361 Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62027468 0.5kb upstream 0.5kb upstream 3522 true C_Quinoa_Scaffold_4446: 4777011-4780532 Chenopodium quinoa
AUR62027468 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_4446: 4777011-4777510 Chenopodium quinoa
AUR62027468 0.5kb downstream 0.5kb downstream 3522 true C_Quinoa_Scaffold_4446: 4777511-4781032 Chenopodium quinoa
AUR62027468 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_4446: 4780533-4781032 Chenopodium quinoa
AUR62027468 1.0kb upstream 1.0kb upstream 4022 true C_Quinoa_Scaffold_4446: 4776511-4780532 Chenopodium quinoa
AUR62027468 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_4446: 4776511-4777510 Chenopodium quinoa
AUR62027468 1.0kb downstream 1.0kb downstream 4022 true C_Quinoa_Scaffold_4446: 4777511-4781532 Chenopodium quinoa
AUR62027468 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_4446: 4780533-4781532 Chenopodium quinoa
AUR62027468 2.0kb upstream 2.0kb upstream 5022 true C_Quinoa_Scaffold_4446: 4775511-4780532 Chenopodium quinoa
AUR62027468 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_4446: 4775511-4777510 Chenopodium quinoa
AUR62027468 2.0kb downstream 2.0kb downstream 5022 true C_Quinoa_Scaffold_4446: 4777511-4782532 Chenopodium quinoa
AUR62027468 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_4446: 4780533-4782532 Chenopodium quinoa
AUR62027468 5.0kb upstream 5.0kb upstream 8022 true C_Quinoa_Scaffold_4446: 4772511-4780532 Chenopodium quinoa
AUR62027468 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_4446: 4772511-4777510 Chenopodium quinoa
AUR62027468 5.0kb downstream 5.0kb downstream 8022 true C_Quinoa_Scaffold_4446: 4777511-4785532 Chenopodium quinoa
AUR62027468 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_4446: 4780533-4785532 Chenopodium quinoa
AUR62027468 10.0kb upstream 10.0kb upstream 13022 true C_Quinoa_Scaffold_4446: 4767511-4780532 Chenopodium quinoa
AUR62027468 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_4446: 4767511-4777510 Chenopodium quinoa
AUR62027468 10.0kb downstream 10.0kb downstream 13022 true C_Quinoa_Scaffold_4446: 4777511-4790532 Chenopodium quinoa
AUR62027468 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_4446: 4780533-4790532 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain