Gene : AUR62005566 C. quinoa v1.0
Defline:  (1 of 6) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  257
Name:  ? AUR62005566 Secondary Identifier:  ? PAC:36320098
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cquinoa ANAEROFRUCAT-PWY Chenopodium quinoa pathologic  
Cquinoa ANAGLYCOLYSIS-PWY Chenopodium quinoa pathologic  
Cquinoa GLUCONEO-PWY Chenopodium quinoa pathologic  
Cquinoa PWY-1042 Chenopodium quinoa pathologic  
Cquinoa PWY-5464 Chenopodium quinoa pathologic  
Cquinoa PWY66-399 Chenopodium quinoa pathologic  
Cquinoa SUCSYN-PWY Chenopodium quinoa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62005566 0.5kb upstream 0.5kb upstream 3123 true C_Quinoa_Scaffold_1214: 4692170-4695292 Chenopodium quinoa
AUR62005566 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1214: 4692170-4692669 Chenopodium quinoa
AUR62005566 0.5kb downstream 0.5kb downstream 3123 true C_Quinoa_Scaffold_1214: 4692670-4695792 Chenopodium quinoa
AUR62005566 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1214: 4695293-4695792 Chenopodium quinoa
AUR62005566 1.0kb upstream 1.0kb upstream 3623 true C_Quinoa_Scaffold_1214: 4691670-4695292 Chenopodium quinoa
AUR62005566 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1214: 4691670-4692669 Chenopodium quinoa
AUR62005566 1.0kb downstream 1.0kb downstream 3623 true C_Quinoa_Scaffold_1214: 4692670-4696292 Chenopodium quinoa
AUR62005566 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1214: 4695293-4696292 Chenopodium quinoa
AUR62005566 2.0kb upstream 2.0kb upstream 4623 true C_Quinoa_Scaffold_1214: 4690670-4695292 Chenopodium quinoa
AUR62005566 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1214: 4690670-4692669 Chenopodium quinoa
AUR62005566 2.0kb downstream 2.0kb downstream 4623 true C_Quinoa_Scaffold_1214: 4692670-4697292 Chenopodium quinoa
AUR62005566 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1214: 4695293-4697292 Chenopodium quinoa
AUR62005566 5.0kb upstream 5.0kb upstream 7623 true C_Quinoa_Scaffold_1214: 4687670-4695292 Chenopodium quinoa
AUR62005566 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1214: 4687670-4692669 Chenopodium quinoa
AUR62005566 5.0kb downstream 5.0kb downstream 7623 true C_Quinoa_Scaffold_1214: 4692670-4700292 Chenopodium quinoa
AUR62005566 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1214: 4695293-4700292 Chenopodium quinoa
AUR62005566 10.0kb upstream 10.0kb upstream 12623 true C_Quinoa_Scaffold_1214: 4682670-4695292 Chenopodium quinoa
AUR62005566 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1214: 4682670-4692669 Chenopodium quinoa
AUR62005566 10.0kb downstream 10.0kb downstream 12623 true C_Quinoa_Scaffold_1214: 4692670-4705292 Chenopodium quinoa
AUR62005566 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1214: 4695293-4705292 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain