Gene : AUR62005504 C. quinoa v1.0
Defline:  (1 of 1) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) Genomic Order:  195
Name:  ? AUR62005504 Secondary Identifier:  ? PAC:36319893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62005504 0.5kb upstream 0.5kb upstream 2134 true C_Quinoa_Scaffold_1214: 3733465-3735598 Chenopodium quinoa
AUR62005504 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_1214: 3733465-3733964 Chenopodium quinoa
AUR62005504 0.5kb downstream 0.5kb downstream 2134 true C_Quinoa_Scaffold_1214: 3733965-3736098 Chenopodium quinoa
AUR62005504 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_1214: 3735599-3736098 Chenopodium quinoa
AUR62005504 1.0kb upstream 1.0kb upstream 2634 true C_Quinoa_Scaffold_1214: 3732965-3735598 Chenopodium quinoa
AUR62005504 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_1214: 3732965-3733964 Chenopodium quinoa
AUR62005504 1.0kb downstream 1.0kb downstream 2634 true C_Quinoa_Scaffold_1214: 3733965-3736598 Chenopodium quinoa
AUR62005504 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_1214: 3735599-3736598 Chenopodium quinoa
AUR62005504 2.0kb upstream 2.0kb upstream 3634 true C_Quinoa_Scaffold_1214: 3731965-3735598 Chenopodium quinoa
AUR62005504 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_1214: 3731965-3733964 Chenopodium quinoa
AUR62005504 2.0kb downstream 2.0kb downstream 3634 true C_Quinoa_Scaffold_1214: 3733965-3737598 Chenopodium quinoa
AUR62005504 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_1214: 3735599-3737598 Chenopodium quinoa
AUR62005504 5.0kb upstream 5.0kb upstream 6634 true C_Quinoa_Scaffold_1214: 3728965-3735598 Chenopodium quinoa
AUR62005504 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_1214: 3728965-3733964 Chenopodium quinoa
AUR62005504 5.0kb downstream 5.0kb downstream 6634 true C_Quinoa_Scaffold_1214: 3733965-3740598 Chenopodium quinoa
AUR62005504 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_1214: 3735599-3740598 Chenopodium quinoa
AUR62005504 10.0kb upstream 10.0kb upstream 11634 true C_Quinoa_Scaffold_1214: 3723965-3735598 Chenopodium quinoa
AUR62005504 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_1214: 3723965-3733964 Chenopodium quinoa
AUR62005504 10.0kb downstream 10.0kb downstream 11634 true C_Quinoa_Scaffold_1214: 3733965-3745598 Chenopodium quinoa
AUR62005504 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_1214: 3735599-3745598 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain