Gene : AUR62033232 C. quinoa v1.0

Defline:  (1 of 13) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  28
Name:  ? AUR62033232 Secondary Identifier:  ? PAC:36293346

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62033232 0.5kb upstream 0.5kb upstream 2945 true C_Quinoa_Scaffold_2896: 485082-488026 Chenopodium quinoa
AUR62033232 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_2896: 485082-485581 Chenopodium quinoa
AUR62033232 0.5kb downstream 0.5kb downstream 2945 true C_Quinoa_Scaffold_2896: 485582-488526 Chenopodium quinoa
AUR62033232 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_2896: 488027-488526 Chenopodium quinoa
AUR62033232 1.0kb upstream 1.0kb upstream 3445 true C_Quinoa_Scaffold_2896: 484582-488026 Chenopodium quinoa
AUR62033232 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_2896: 484582-485581 Chenopodium quinoa
AUR62033232 1.0kb downstream 1.0kb downstream 3445 true C_Quinoa_Scaffold_2896: 485582-489026 Chenopodium quinoa
AUR62033232 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_2896: 488027-489026 Chenopodium quinoa
AUR62033232 2.0kb upstream 2.0kb upstream 4445 true C_Quinoa_Scaffold_2896: 483582-488026 Chenopodium quinoa
AUR62033232 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_2896: 483582-485581 Chenopodium quinoa
AUR62033232 2.0kb downstream 2.0kb downstream 4445 true C_Quinoa_Scaffold_2896: 485582-490026 Chenopodium quinoa
AUR62033232 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_2896: 488027-490026 Chenopodium quinoa
AUR62033232 5.0kb upstream 5.0kb upstream 7445 true C_Quinoa_Scaffold_2896: 480582-488026 Chenopodium quinoa
AUR62033232 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_2896: 480582-485581 Chenopodium quinoa
AUR62033232 5.0kb downstream 5.0kb downstream 7445 true C_Quinoa_Scaffold_2896: 485582-493026 Chenopodium quinoa
AUR62033232 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_2896: 488027-493026 Chenopodium quinoa
AUR62033232 10.0kb upstream 10.0kb upstream 12445 true C_Quinoa_Scaffold_2896: 475582-488026 Chenopodium quinoa
AUR62033232 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_2896: 475582-485581 Chenopodium quinoa
AUR62033232 10.0kb downstream 10.0kb downstream 12445 true C_Quinoa_Scaffold_2896: 485582-498026 Chenopodium quinoa
AUR62033232 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_2896: 488027-498026 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain